RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 UBA1P22314 1058 aaKnown RBP12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 DEFB103AP81534 67 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PTK7Q13308 1070 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 HIC1Q14526 733 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PGM5Q15124 567 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KIAA0753Q2KHM9 967 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CELF3Q5SZQ8 465 aaKnown RBP12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 MYSM1Q5VVJ2 828 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CHST3Q7LGC8 479 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 VSIG10LQ86VR7 867 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 MICALL1Q8N3F8 863 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 ARNTL2Q8WYA1 636 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 NECAB3Q96P71 396 aaPredicted RBP12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 C16orf70Q9BSU1 422 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TSPYL2Q9H2G4 693 aaPredicted RBP12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 RIOX1Q9H6W3 641 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CERS4Q9HA82 394 aa12.74□□□□□ -0.37
SPTLC1P4-201ENST00000435997 ABHD14A-ACY1A0A1B0GW23 586 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CYTH3O43739 400 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TLL1O43897 1013 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 DHX16O60231 1041 aaKnown RBP12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PPFIA4O75335 1185 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PDE4AP27815 886 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KCNJ6P48051 423 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KCNQ1P51787 676 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 SP2Q02086 613 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 GRB10Q13322 594 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 GRM4Q14833 912 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 AAK1Q2M2I8 961 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 HSDL1Q3SXM5 330 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KCNV1Q6PIU1 500 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TMCO2Q7Z6W1 182 aaPredicted RBP12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 C7orf31Q8N865 590 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 COL4A4P53420 1690 aaPredicted RBP12.73□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TRANK1O15050 2925 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PTPRSQ13332 1948 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 EFCAB14O75071 495 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TGFB3P10600 412 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 COL9A1P20849 921 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 HOXA13P31271 388 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CHMP4BP1P59074 171 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TROAPQ12815 778 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 ZNF618Q5T7W0 954 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 SERINC5Q86VE9 423 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 IL27Q8NEV9 243 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 SPATA33Q96N06 139 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 SENP2Q9HC62 589 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 COG5Q9UP83 839 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
SPTLC1P4-201ENST00000435997 COL4A6Q14031 1691 aa12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 KIAA1217Q5T5P2 1943 aa12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 RBAK-RBAKDNI3L0D1 243 aa12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 GGPS1O95749 300 aa12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 CYP21A2P08686 494 aa12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 ERVK-21P61565 698 aa12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 ZNF200P98182 395 aaPredicted RBP12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 GPKOWQ92917 476 aaPredicted RBP eCLIP12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 INPP4AQ96PE3 977 aaPredicted RBP12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 ALG1Q9BT22 464 aa12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 LMCD1Q9NZU5 365 aa12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 TAF6LQ9Y6J9 622 aa12.71□□□□□ -0.37
SPTLC1P4-201ENST00000435997 EMSYQ7Z589 1322 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 LINC01553A4QN01 128 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 LGR5O75473 907 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 CCND2P30279 289 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 ICAM3P32942 547 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 MRPS9P82933 396 aaKnown RBP12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SKIV2LQ15477 1246 aaKnown RBP12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 HOMER1Q86YM7 354 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 GDPD5Q8WTR4 605 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 PIGSQ96S52 555 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 RAD9AQ99638 391 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SUGCTQ9HAC7 445 aa12.7□□□□□ -0.38
SPTLC1P4-201ENST00000435997 PNMA6FA0A0J9YX94 578 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 CAND2O75155 1236 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 STAM2O75886 525 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 LGALS2P05162 132 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 MYCLP12524 364 aaPredicted RBP12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 ANTXR2P58335 489 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 HTRA4P83105 476 aaPredicted RBP12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 PTH1RQ03431 593 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 TRAF1Q13077 416 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SEMA3FQ13275 785 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 PLEKHG4Q58EX7 1191 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 METTL7BQ6UX53 244 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 HLA-CQ95604 372 aa12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 TGS1Q96RS0 853 aaKnown RBP12.69□□□□□ -0.38
SPTLC1P4-201ENST00000435997 H3BRB1 525 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 IFIT3O14879 490 aaKnown RBP12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SMIM10L2AP0DMW4 78 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 SMIM10L2BP0DMW5 78 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 CHMLP26374 656 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 TRDNQ13061 729 aa12.68□□□□□ -0.38
SPTLC1P4-201ENST00000435997 IKBKEQ14164 716 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms