RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 DOCK5Q9H7D0 1870 aa25.87■■□□□ 1.73
HMG20B-205ENST00000435022 EPOPA6NHQ4 379 aa25.86■■□□□ 1.73
HMG20B-205ENST00000435022 GCOM1H8Y6P7 765 aaPredicted RBP25.86■■□□□ 1.73
HMG20B-205ENST00000435022 GGPS1O95749 300 aa25.86■■□□□ 1.73
HMG20B-205ENST00000435022 CA3P07451 260 aa25.86■■□□□ 1.73
HMG20B-205ENST00000435022 POLR2MP0CAP2 368 aa25.86■■□□□ 1.73
HMG20B-205ENST00000435022 KIAA0753Q2KHM9 967 aa25.86■■□□□ 1.73
HMG20B-205ENST00000435022 FCHSD1Q86WN1 690 aa25.86■■□□□ 1.73
HMG20B-205ENST00000435022 CAGE1Q8TC20 777 aa25.86■■□□□ 1.73
HMG20B-205ENST00000435022 AFAP1L1Q8TED9 768 aa25.86■■□□□ 1.73
HMG20B-205ENST00000435022 PIBF1Q8WXW3 757 aa25.86■■□□□ 1.73
HMG20B-205ENST00000435022 TRANK1O15050 2925 aa25.85■■□□□ 1.73
HMG20B-205ENST00000435022 ERICH2A1L162 156 aa25.85■■□□□ 1.73
HMG20B-205ENST00000435022 NBNO60934 754 aa25.85■■□□□ 1.73
HMG20B-205ENST00000435022 MRPS9P82933 396 aaKnown RBP25.85■■□□□ 1.73
HMG20B-205ENST00000435022 SEMA3FQ13275 785 aa25.85■■□□□ 1.73
HMG20B-205ENST00000435022 LRRC8DQ7L1W4 858 aa25.85■■□□□ 1.73
HMG20B-205ENST00000435022 SPRED2Q7Z698 418 aa25.85■■□□□ 1.73
HMG20B-205ENST00000435022 SLC9A7Q96T83 725 aa25.85■■□□□ 1.73
HMG20B-205ENST00000435022 C16orf70Q9BSU1 422 aa25.85■■□□□ 1.73
HMG20B-205ENST00000435022 FTOQ9C0B1 505 aaKnown RBP eCLIP25.85■■□□□ 1.73
HMG20B-205ENST00000435022 TTC28Q96AY4 2481 aa25.85■■□□□ 1.73
HMG20B-205ENST00000435022 RFXAPO00287 272 aa25.84■■□□□ 1.73
HMG20B-205ENST00000435022 CKBP12277 381 aa25.84■■□□□ 1.73
HMG20B-205ENST00000435022 ACTN1P12814 892 aa25.84■■□□□ 1.73
HMG20B-205ENST00000435022 SELPP16109 830 aa25.84■■□□□ 1.73
HMG20B-205ENST00000435022 IGFBP4P22692 258 aa25.84■■□□□ 1.73
HMG20B-205ENST00000435022 CCDC85BQ15834 202 aaPredicted RBP25.84■■□□□ 1.73
HMG20B-205ENST00000435022 SKAP1Q86WV1 359 aa25.84■■□□□ 1.73
HMG20B-205ENST00000435022 ZNF654Q8IZM8 581 aa25.84■■□□□ 1.73
HMG20B-205ENST00000435022 SPATA33Q96N06 139 aa25.84■■□□□ 1.73
HMG20B-205ENST00000435022 TELO2Q9Y4R8 837 aa25.84■■□□□ 1.73
HMG20B-205ENST00000435022 CCND2P30279 289 aa25.83■■□□□ 1.73
HMG20B-205ENST00000435022 MBTPS1Q14703 1052 aa25.83■■□□□ 1.73
HMG20B-205ENST00000435022 SART3Q15020 963 aaKnown RBP25.83■■□□□ 1.73
HMG20B-205ENST00000435022 TMCO2Q7Z6W1 182 aaPredicted RBP25.83■■□□□ 1.73
HMG20B-205ENST00000435022 CATIPQ7Z7H3 387 aa25.83■■□□□ 1.73
HMG20B-205ENST00000435022 HERC6Q8IVU3 1022 aa25.83■■□□□ 1.73
HMG20B-205ENST00000435022 C7orf31Q8N865 590 aa25.83■■□□□ 1.73
HMG20B-205ENST00000435022 SPZ1Q9BXG8 430 aa25.83■■□□□ 1.73
HMG20B-205ENST00000435022 PLEKHA8P1O95397 391 aa25.82■■□□□ 1.72
HMG20B-205ENST00000435022 CXCL10P02778 98 aa25.82■■□□□ 1.72
HMG20B-205ENST00000435022 CCDC155Q8N6L0 562 aa25.82■■□□□ 1.72
HMG20B-205ENST00000435022 PHOSPHO2Q8TCD6 241 aa25.82■■□□□ 1.72
HMG20B-205ENST00000435022 INPP4AQ96PE3 977 aaPredicted RBP25.82■■□□□ 1.72
HMG20B-205ENST00000435022 KATNAL1Q9BW62 490 aa25.82■■□□□ 1.72
HMG20B-205ENST00000435022 CERS4Q9HA82 394 aa25.82■■□□□ 1.72
HMG20B-205ENST00000435022 COL4A4P53420 1690 aaPredicted RBP25.82■■□□□ 1.72
HMG20B-205ENST00000435022 SH2B2O14492 632 aaPredicted RBP25.81■■□□□ 1.72
HMG20B-205ENST00000435022 PRC1O43663 620 aa25.81■■□□□ 1.72
HMG20B-205ENST00000435022 PPFIA4O75335 1185 aa25.81■■□□□ 1.72
HMG20B-205ENST00000435022 BAIAP3O94812 1187 aa25.81■■□□□ 1.72
HMG20B-205ENST00000435022 WDR5P61964 334 aaKnown RBP25.81■■□□□ 1.72
HMG20B-205ENST00000435022 DEFB103AP81534 67 aa25.81■■□□□ 1.72
HMG20B-205ENST00000435022 TAP1Q03518 808 aa25.81■■□□□ 1.72
HMG20B-205ENST00000435022 PTK7Q13308 1070 aa25.81■■□□□ 1.72
HMG20B-205ENST00000435022 KCNV1Q6PIU1 500 aa25.81■■□□□ 1.72
HMG20B-205ENST00000435022 MAP3K14Q99558 947 aa25.81■■□□□ 1.72
HMG20B-205ENST00000435022 ESYT1Q9BSJ8 1104 aa25.81■■□□□ 1.72
HMG20B-205ENST00000435022 MEIS2O14770 477 aa25.8■■□□□ 1.72
HMG20B-205ENST00000435022 SLC27A2O14975 620 aa25.8■■□□□ 1.72
HMG20B-205ENST00000435022 DDAH1O94760 285 aa25.8■■□□□ 1.72
HMG20B-205ENST00000435022 TGFB3P10600 412 aa25.8■■□□□ 1.72
HMG20B-205ENST00000435022 RXRAP19793 462 aa25.8■■□□□ 1.72
HMG20B-205ENST00000435022 HOXC8P31273 242 aa25.8■■□□□ 1.72
HMG20B-205ENST00000435022 TJAP1Q5JTD0 557 aa25.8■■□□□ 1.72
HMG20B-205ENST00000435022 ZNF618Q5T7W0 954 aa25.8■■□□□ 1.72
HMG20B-205ENST00000435022 USP17L6PQ6QN14 398 aa25.8■■□□□ 1.72
HMG20B-205ENST00000435022 SRBD1Q8N5C6 995 aaKnown RBP25.8■■□□□ 1.72
HMG20B-205ENST00000435022 LCHNA4D1U4 455 aa25.79■■□□□ 1.72
HMG20B-205ENST00000435022 ICAM3P32942 547 aa25.79■■□□□ 1.72
HMG20B-205ENST00000435022 TRAF1Q13077 416 aa25.79■■□□□ 1.72
HMG20B-205ENST00000435022 CMTR1Q8N1G2 835 aaKnown RBP25.79■■□□□ 1.72
HMG20B-205ENST00000435022 THEGQ9P2T0 379 aa25.79■■□□□ 1.72
HMG20B-205ENST00000435022 LGALS2P05162 132 aa25.78■■□□□ 1.72
HMG20B-205ENST00000435022 NECTIN1Q15223 517 aa25.78■■□□□ 1.72
HMG20B-205ENST00000435022 KRT40Q6A162 431 aa25.78■■□□□ 1.72
HMG20B-205ENST00000435022 RAB11FIP4Q86YS3 637 aa25.78■■□□□ 1.72
HMG20B-205ENST00000435022 MTA3Q9BTC8 594 aa25.78■■□□□ 1.72
HMG20B-205ENST00000435022 RTEL1Q9NZ71 1219 aa25.78■■□□□ 1.72
HMG20B-205ENST00000435022 SPATA31C2B4DYI2 1134 aa25.77■■□□□ 1.72
HMG20B-205ENST00000435022 CNKSR3Q6P9H4 555 aa25.77■■□□□ 1.72
HMG20B-205ENST00000435022 SERINC5Q86VE9 423 aa25.77■■□□□ 1.72
HMG20B-205ENST00000435022 CTCFLQ8NI51 663 aaPredicted RBP25.77■■□□□ 1.72
HMG20B-205ENST00000435022 OSBPL7Q9BZF2 842 aa25.77■■□□□ 1.72
HMG20B-205ENST00000435022 MLXIPQ9HAP2 919 aa25.77■■□□□ 1.72
HMG20B-205ENST00000435022 PRRC2BQ5JSZ5 2229 aaKnown RBP25.77■■□□□ 1.72
HMG20B-205ENST00000435022 MKRN4PQ13434 485 aaPredicted RBP25.76■■□□□ 1.71
HMG20B-205ENST00000435022 CREB3L3Q68CJ9 461 aa25.76■■□□□ 1.71
HMG20B-205ENST00000435022 TRIM50Q86XT4 487 aa25.76■■□□□ 1.71
HMG20B-205ENST00000435022 RRP36Q96EU6 259 aaKnown RBP25.76■■□□□ 1.71
HMG20B-205ENST00000435022 LRRC2Q9BYS8 371 aa25.76■■□□□ 1.71
HMG20B-205ENST00000435022 MTCH2Q9Y6C9 303 aa25.76■■□□□ 1.71
HMG20B-205ENST00000435022 H3BRB1 525 aa25.75■■□□□ 1.71
HMG20B-205ENST00000435022 PIK3CDO00329 1044 aa25.75■■□□□ 1.71
HMG20B-205ENST00000435022 POU3F3P20264 500 aaPredicted RBP25.75■■□□□ 1.71
HMG20B-205ENST00000435022 SMARCA1P28370 1054 aa25.75■■□□□ 1.71
HMG20B-205ENST00000435022 MCM5P33992 734 aa25.75■■□□□ 1.71
HMG20B-205ENST00000435022 CASC1Q6TDU7 716 aa25.75■■□□□ 1.71
HMG20B-205ENST00000435022 CYFIP1Q7L576 1253 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms