RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 MRVI1Q9Y6F6 885 aa16.4■□□□□ 0.22
CSTF3-202ENST00000431742 ALPK3Q96L96 1907 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 FAM86B1E9PN63 330 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 MEIS1O00470 390 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 CTAGE5O15320 804 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 FAM86B2P0C5J1 330 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 TXNP10599 105 aaKnown RBP16.39■□□□□ 0.21
CSTF3-202ENST00000431742 TGFB3P10600 412 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 PTGS1P23219 599 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 USP11P51784 963 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 GJA9P57773 515 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 INF2Q27J81 1249 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 GJC2Q5T442 439 aaPredicted RBP16.39■□□□□ 0.21
CSTF3-202ENST00000431742 PIK3AP1Q6ZUJ8 805 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 NLRX1Q86UT6 975 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 CYP2W1Q8TAV3 490 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 LENG9Q96B70 501 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 MBOAT7Q96N66 472 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 XPNPEP3Q9NQH7 507 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 Q9Y3F1 56 aa16.39■□□□□ 0.21
CSTF3-202ENST00000431742 CYP3A7-CYP3A51PA0A087WV96 503 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 CCDC85CA6NKD9 419 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 KIF28PB7ZC32 967 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 UBA1P22314 1058 aaKnown RBP16.38■□□□□ 0.21
CSTF3-202ENST00000431742 CYP3A7P24462 503 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 U2AF2P26368 475 aaKnown RBP eCLIP16.38■□□□□ 0.218e-35■■■■□ 24.6
CSTF3-202ENST00000431742 CST5P28325 142 aaPredicted RBP16.38■□□□□ 0.21
CSTF3-202ENST00000431742 MNX1P50219 401 aaPredicted RBP16.38■□□□□ 0.21
CSTF3-202ENST00000431742 SP2Q02086 613 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 ARHGAP1Q07960 439 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 MTMR1Q13613 665 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 LARP1BQ659C4 914 aaKnown RBP16.38■□□□□ 0.21
CSTF3-202ENST00000431742 MOXD1Q6UVY6 613 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 TLK2Q86UE8 772 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 CDHR1Q96JP9 859 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 SCN10AQ9Y5Y9 1956 aa16.38■□□□□ 0.21
CSTF3-202ENST00000431742 MAFGO15525 162 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 PGK1P00558 417 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 KCNA2P16389 499 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 PDCP20941 246 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 SOX10P56693 466 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 LY6KQ17RY6 165 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 NEK8Q86SG6 692 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 ANKLE1Q8NAG6 615 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 KLHDC9Q8NEP7 349 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 COPS5Q92905 334 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 EMID1Q96A84 441 aaPredicted RBP16.37■□□□□ 0.21
CSTF3-202ENST00000431742 SENP7Q9BQF6 1050 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 KCNH7Q9NS40 1196 aa16.37■□□□□ 0.21
CSTF3-202ENST00000431742 MYADML2A6NDP7 307 aa16.36■□□□□ 0.21
CSTF3-202ENST00000431742 TDP2O95551 362 aa16.36■□□□□ 0.21
CSTF3-202ENST00000431742 GH1P01241 217 aa16.36■□□□□ 0.21
CSTF3-202ENST00000431742 ARP10275 920 aa16.36■□□□□ 0.21
CSTF3-202ENST00000431742 EN2P19622 333 aaPredicted RBP16.36■□□□□ 0.21
CSTF3-202ENST00000431742 ZNF76P36508 570 aa16.36■□□□□ 0.21
CSTF3-202ENST00000431742 IRX5P78411 483 aaPredicted RBP16.36■□□□□ 0.21
CSTF3-202ENST00000431742 SETQ01105 290 aaPredicted RBP16.36■□□□□ 0.21
CSTF3-202ENST00000431742 BECN1Q14457 450 aa16.36■□□□□ 0.21
CSTF3-202ENST00000431742 LRRC41Q15345 812 aa16.36■□□□□ 0.21
CSTF3-202ENST00000431742 CCSAPQ6IQ19 270 aaPredicted RBP16.36■□□□□ 0.21
CSTF3-202ENST00000431742 PLA2G4DQ86XP0 818 aa16.36■□□□□ 0.21
CSTF3-202ENST00000431742 NOSTRINQ8IVI9 506 aa16.36■□□□□ 0.21
CSTF3-202ENST00000431742 H3BQV1 296 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 DNM1LO00429 736 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 ATP9AO75110 1047 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 GGPS1O95749 300 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 TFRCP02786 760 aaKnown RBP16.35■□□□□ 0.21
CSTF3-202ENST00000431742 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
CSTF3-202ENST00000431742 GCFC2P16383 781 aaKnown RBP16.35■□□□□ 0.21
CSTF3-202ENST00000431742 SYT1P21579 422 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 NEDD9Q14511 834 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 Q4G0T1 1027 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 CELF3Q5SZQ8 465 aaKnown RBP16.35■□□□□ 0.21
CSTF3-202ENST00000431742 IFFO2Q5TF58 517 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 MYSM1Q5VVJ2 828 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 PPP4R3AQ6IN85 833 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 UBE2Q1Q7Z7E8 422 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 ARRDC4Q8NCT1 418 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 OR6J1Q8NGC5 347 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 AP5M1Q9H0R1 490 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 BCAS3Q9H6U6 928 aa16.35■□□□□ 0.21
CSTF3-202ENST00000431742 AGO4Q9HCK5 861 aaKnown RBP16.35■□□□□ 0.21
CSTF3-202ENST00000431742 MYH9P35579 1960 aaKnown RBP16.35■□□□□ 0.21
CSTF3-202ENST00000431742 A6NJR5 290 aa16.34■□□□□ 0.21
CSTF3-202ENST00000431742 WNT7AO00755 349 aa16.34■□□□□ 0.21
CSTF3-202ENST00000431742 DYNC1LI2O43237 492 aaPredicted RBP16.34■□□□□ 0.21
CSTF3-202ENST00000431742 FARP2O94887 1054 aaPredicted RBP16.34■□□□□ 0.21
CSTF3-202ENST00000431742 HSP90AA1P07900 732 aaKnown RBP16.34■□□□□ 0.21
CSTF3-202ENST00000431742 C6orf222P0C671 652 aaPredicted RBP16.34■□□□□ 0.21
CSTF3-202ENST00000431742 HOXD8P13378 290 aaPredicted RBP16.34■□□□□ 0.21
CSTF3-202ENST00000431742 ITGB3BPQ13352 177 aaPredicted RBP16.34■□□□□ 0.21
CSTF3-202ENST00000431742 LAMC2Q13753 1193 aa16.34■□□□□ 0.21
CSTF3-202ENST00000431742 FSCN1Q16658 493 aaKnown RBP16.34■□□□□ 0.21
CSTF3-202ENST00000431742 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
CSTF3-202ENST00000431742 PRR16Q569H4 304 aa16.34■□□□□ 0.21
CSTF3-202ENST00000431742 METTL7BQ6UX53 244 aa16.34■□□□□ 0.21
CSTF3-202ENST00000431742 RNF180Q86T96 592 aa16.34■□□□□ 0.21
CSTF3-202ENST00000431742 GIMAP8Q8ND71 665 aaPredicted RBP16.34■□□□□ 0.21
CSTF3-202ENST00000431742 SPC25Q9HBM1 224 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms