RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DDAH1O94760 285 aa19.75■□□□□ 0.75
TRIM39-209ENST00000428728 ADGRE1Q14246 886 aa19.75■□□□□ 0.75
TRIM39-209ENST00000428728 HSDL1Q3SXM5 330 aa19.75■□□□□ 0.75
TRIM39-209ENST00000428728 CELF3Q5SZQ8 465 aaKnown RBP19.75■□□□□ 0.75
TRIM39-209ENST00000428728 MYSM1Q5VVJ2 828 aa19.75■□□□□ 0.75
TRIM39-209ENST00000428728 KCNV1Q6PIU1 500 aa19.75■□□□□ 0.75
TRIM39-209ENST00000428728 NFXL1Q6ZNB6 911 aa19.75■□□□□ 0.75
TRIM39-209ENST00000428728 AFAP1L1Q8TED9 768 aa19.75■□□□□ 0.75
TRIM39-209ENST00000428728 DHX38Q92620 1227 aaKnown RBP19.75■□□□□ 0.75
TRIM39-209ENST00000428728 ESYT1Q9BSJ8 1104 aa19.75■□□□□ 0.75
TRIM39-209ENST00000428728 KIF5BP33176 963 aa19.74■□□□□ 0.75
TRIM39-209ENST00000428728 SP2Q02086 613 aa19.74■□□□□ 0.75
TRIM39-209ENST00000428728 COL9A3Q14050 684 aaPredicted RBP19.74■□□□□ 0.75
TRIM39-209ENST00000428728 LRRC8DQ7L1W4 858 aa19.74■□□□□ 0.75
TRIM39-209ENST00000428728 RRP36Q96EU6 259 aaKnown RBP19.74■□□□□ 0.75
TRIM39-209ENST00000428728 SLC9A7Q96T83 725 aa19.74■□□□□ 0.75
TRIM39-209ENST00000428728 SPZ1Q9BXG8 430 aa19.74■□□□□ 0.75
TRIM39-209ENST00000428728 PRDM6Q9NQX0 595 aa19.74■□□□□ 0.75
TRIM39-209ENST00000428728 CCDC69A6NI79 296 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 HAS3O00219 553 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 SLC27A2O14975 620 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 PLEKHA8P1O95397 391 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 CA3P07451 260 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 HOXD8P13378 290 aaPredicted RBP19.73■□□□□ 0.75
TRIM39-209ENST00000428728 SELPP16109 830 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 RXRAP19793 462 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 MCM5P33992 734 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 CCDC85BQ15834 202 aaPredicted RBP19.73■□□□□ 0.75
TRIM39-209ENST00000428728 SKAP1Q86WV1 359 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 RAB11FIP4Q86YS3 637 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 ANO2Q9NQ90 1003 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 SEC63Q9UGP8 760 aaKnown RBP19.73■□□□□ 0.75
TRIM39-209ENST00000428728 FRMPD4Q14CM0 1322 aa19.73■□□□□ 0.75
TRIM39-209ENST00000428728 CHD9Q3L8U1 2897 aa19.72■□□□□ 0.75
TRIM39-209ENST00000428728 RBAK-RBAKDNI3L0D1 243 aa19.72■□□□□ 0.75
TRIM39-209ENST00000428728 SH2B2O14492 632 aaPredicted RBP19.72■□□□□ 0.75
TRIM39-209ENST00000428728 CKBP12277 381 aa19.72■□□□□ 0.75
TRIM39-209ENST00000428728 ZNF200P98182 395 aaPredicted RBP19.72■□□□□ 0.75
TRIM39-209ENST00000428728 SMARCC2Q8TAQ2 1214 aa19.72■□□□□ 0.75
TRIM39-209ENST00000428728 MAP3K14Q99558 947 aa19.72■□□□□ 0.75
TRIM39-209ENST00000428728 MLXIPQ9HAP2 919 aa19.72■□□□□ 0.75
TRIM39-209ENST00000428728 TGFB3P10600 412 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 KCNJ6P48051 423 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 MRPS9P82933 396 aaKnown RBP19.71■□□□□ 0.75
TRIM39-209ENST00000428728 GNPTABQ3T906 1256 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 CREB3L3Q68CJ9 461 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 USP17L6PQ6QN14 398 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 CMTR1Q8N1G2 835 aaKnown RBP19.71■□□□□ 0.75
TRIM39-209ENST00000428728 MICALL1Q8N3F8 863 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 CUL5Q93034 780 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 WNT8BQ93098 351 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 TMEM87BQ96K49 555 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 LRRC2Q9BYS8 371 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 BCAS3Q9H6U6 928 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 CERS4Q9HA82 394 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 SIP14410 1827 aa19.71■□□□□ 0.75
TRIM39-209ENST00000428728 PPFIA4O75335 1185 aa19.7■□□□□ 0.74
TRIM39-209ENST00000428728 BAIAP3O94812 1187 aa19.7■□□□□ 0.74
TRIM39-209ENST00000428728 RBL2Q08999 1139 aa19.7■□□□□ 0.74
TRIM39-209ENST00000428728 PTK7Q13308 1070 aa19.7■□□□□ 0.74
TRIM39-209ENST00000428728 HIC1Q14526 733 aa19.7■□□□□ 0.74
TRIM39-209ENST00000428728 GPNMBQ14956 572 aa19.7■□□□□ 0.74
TRIM39-209ENST00000428728 HERC6Q8IVU3 1022 aa19.7■□□□□ 0.74
TRIM39-209ENST00000428728 SRBD1Q8N5C6 995 aaKnown RBP19.7■□□□□ 0.74
TRIM39-209ENST00000428728 INPP4AQ96PE3 977 aaPredicted RBP19.7■□□□□ 0.74
TRIM39-209ENST00000428728 MTA3Q9BTC8 594 aa19.7■□□□□ 0.74
TRIM39-209ENST00000428728 RTEL1Q9NZ71 1219 aa19.7■□□□□ 0.74
TRIM39-209ENST00000428728 NOP56O00567 594 aaKnown RBP19.69■□□□□ 0.74
TRIM39-209ENST00000428728 NBNO60934 754 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 LGALS2P05162 132 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 GNAQP50148 359 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 WDR5P61964 334 aaKnown RBP19.69■□□□□ 0.74
TRIM39-209ENST00000428728 SEMA3FQ13275 785 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 ZNF618Q5T7W0 954 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 CNKSR3Q6P9H4 555 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 MICU3Q86XE3 530 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 PHOSPHO2Q8TCD6 241 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 LZTS2Q9BRK4 669 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 C16orf70Q9BSU1 422 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 CHD7Q9P2D1 2997 aa19.69■□□□□ 0.74
TRIM39-209ENST00000428728 PRRC2BQ5JSZ5 2229 aaKnown RBP19.68■□□□□ 0.74
TRIM39-209ENST00000428728 TCF20Q9UGU0 1960 aaKnown RBP19.68■□□□□ 0.74
TRIM39-209ENST00000428728 hCG_1642624A0A1W2PR95 340 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 FIBPO43427 364 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 STAM2O75886 525 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 ARHGEF15O94989 841 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 DEFB103AP81534 67 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 SP4Q02446 784 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 NECTIN1Q15223 517 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 TCTN1Q2MV58 587 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 TRIM71Q2Q1W2 868 aaKnown RBP19.68■□□□□ 0.74
TRIM39-209ENST00000428728 CYFIP1Q7L576 1253 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 TMCO2Q7Z6W1 182 aaPredicted RBP19.68■□□□□ 0.74
TRIM39-209ENST00000428728 TMTC2Q8N394 836 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 THEGQ9P2T0 379 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 SLC12A7Q9Y666 1083 aa19.68■□□□□ 0.74
TRIM39-209ENST00000428728 NLRC5Q86WI3 1866 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 VCANP13611 3396 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 KIF28PB7ZC32 967 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 H3BRB1 525 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms