RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 DEFB128Q7Z7B8 93 aa21.21■□□□□ 0.99
PSPC1-202ENST00000427943 VWCEQ96DN2 955 aa21.21■□□□□ 0.99
PSPC1-202ENST00000427943 RTEL1Q9NZ71 1219 aa21.21■□□□□ 0.99
PSPC1-202ENST00000427943 BRPF3Q9ULD4 1205 aa21.21■□□□□ 0.99
PSPC1-202ENST00000427943 CDH23Q9H251 3354 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 F2P00734 622 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 PBX2P40425 430 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 MFSD10Q14728 455 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 TSGA10IPQ3SY00 556 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 DHX32Q7L7V1 743 aaKnown RBP21.2■□□□□ 0.98
PSPC1-202ENST00000427943 SLC17A8Q8NDX2 589 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 MYLIPQ8WY64 445 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 PBX4Q9BYU1 374 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 MTIF3Q9H2K0 278 aaKnown RBP21.2■□□□□ 0.98
PSPC1-202ENST00000427943 BCAS3Q9H6U6 928 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 HDAC6Q9UBN7 1215 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 CNTNAP5Q8WYK1 1306 aa21.2■□□□□ 0.98
PSPC1-202ENST00000427943 TMEM265A0A087WTH1 108 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 PIK3CDO00329 1044 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 TGFB3P10600 412 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 CPA1P15085 419 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 SEMA3FQ13275 785 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 KRT32Q14532 448 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 UBE2SQ16763 222 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 KIAA0753Q2KHM9 967 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 GNPTABQ3T906 1256 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 SESTD1Q86VW0 696 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 RPUSD2Q8IZ73 545 aaKnown RBP21.19■□□□□ 0.98
PSPC1-202ENST00000427943 TIFAQ96CG3 184 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 INPP4AQ96PE3 977 aaPredicted RBP21.19■□□□□ 0.98
PSPC1-202ENST00000427943 CTAGE1Q96RT6 745 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 KATNAL1Q9BW62 490 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 MLXIPQ9HAP2 919 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 GTF2IRD1Q9UHL9 959 aa21.19■□□□□ 0.98
PSPC1-202ENST00000427943 ZBBXA8MT70 800 aa21.18■□□□□ 0.98
PSPC1-202ENST00000427943 HAS3O00219 553 aa21.18■□□□□ 0.98
PSPC1-202ENST00000427943 PITPNM1O00562 1244 aa21.18■□□□□ 0.98
PSPC1-202ENST00000427943 ZBTB43O43298 467 aa21.18■□□□□ 0.98
PSPC1-202ENST00000427943 HOXD8P13378 290 aaPredicted RBP21.18■□□□□ 0.98
PSPC1-202ENST00000427943 RTN1Q16799 776 aa21.18■□□□□ 0.98
PSPC1-202ENST00000427943 HEATR3Q7Z4Q2 680 aa21.18■□□□□ 0.98
PSPC1-202ENST00000427943 C7orf31Q8N865 590 aa21.18■□□□□ 0.98
PSPC1-202ENST00000427943 RETREG2Q8NC44 543 aa21.18■□□□□ 0.98
PSPC1-202ENST00000427943 EYSQ5T1H1 3165 aa21.18■□□□□ 0.98
PSPC1-202ENST00000427943 MYO9BQ13459 2157 aa21.17■□□□□ 0.98
PSPC1-202ENST00000427943 KLF18A0A0U1RQI7 1052 aa21.17■□□□□ 0.98
PSPC1-202ENST00000427943 STAM2O75886 525 aa21.17■□□□□ 0.98
PSPC1-202ENST00000427943 IQCF3P0C7M6 154 aa21.17■□□□□ 0.98
PSPC1-202ENST00000427943 ICAM3P32942 547 aa21.17■□□□□ 0.98
PSPC1-202ENST00000427943 BFSP2Q13515 415 aa21.17■□□□□ 0.98
PSPC1-202ENST00000427943 PCNX4Q63HM2 1172 aa21.17■□□□□ 0.98
PSPC1-202ENST00000427943 DHX38Q92620 1227 aaKnown RBP21.17■□□□□ 0.98
PSPC1-202ENST00000427943 PSTPIP2Q9H939 334 aa21.17■□□□□ 0.98
PSPC1-202ENST00000427943 RBM28Q9NW13 759 aaKnown RBP21.17■□□□□ 0.98
PSPC1-202ENST00000427943 NAP1L2Q9ULW6 460 aaPredicted RBP21.17■□□□□ 0.98
PSPC1-202ENST00000427943 KAT6AQ92794 2004 aa21.17■□□□□ 0.98
PSPC1-202ENST00000427943 GOLGA8AA7E2F4 631 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 GOLGA8BA8MQT2 603 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 FIBPO43427 364 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 PPFIA4O75335 1185 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 NEFLP07196 543 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 PFKMP08237 780 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 GRIN2CQ14957 1233 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 CYFIP1Q7L576 1253 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 CCDC155Q8N6L0 562 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 ZNF576Q9H609 170 aa21.16■□□□□ 0.98
PSPC1-202ENST00000427943 CHD9Q3L8U1 2897 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 SPATA31C2B4DYI2 1134 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 RBAK-RBAKDNI3L0D1 243 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 NOP56O00567 594 aaKnown RBP21.15■□□□□ 0.98
PSPC1-202ENST00000427943 HSPA4P34932 840 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 RFC2P35250 354 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 ZNF200P98182 395 aaPredicted RBP21.15■□□□□ 0.98
PSPC1-202ENST00000427943 WWC2Q6AWC2 1192 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 CAGE1Q8TC20 777 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 JAKMIP1Q96N16 626 aaKnown RBP21.15■□□□□ 0.98
PSPC1-202ENST00000427943 C16orf70Q9BSU1 422 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 SNX14Q9Y5W7 946 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 SLC4A7Q9Y6M7 1214 aa21.15■□□□□ 0.98
PSPC1-202ENST00000427943 LGALS2P05162 132 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 HMGB1P09429 215 aaKnown RBP21.14■□□□□ 0.97
PSPC1-202ENST00000427943 FOSL2P15408 326 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 CDC27P30260 824 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 RABGGTBP53611 331 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 FGD1P98174 961 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 SP4Q02446 784 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 FUT2Q10981 343 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 NEDD9Q14511 834 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 HIC1Q14526 733 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 XRRA1Q6P2D8 792 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 AFAP1L1Q8TED9 768 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 KCNB2Q92953 911 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 FTOQ9C0B1 505 aaKnown RBP eCLIP21.14■□□□□ 0.97
PSPC1-202ENST00000427943 NKX2-4Q9H2Z4 354 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 YBX2Q9Y2T7 364 aaKnown RBP21.14■□□□□ 0.97
PSPC1-202ENST00000427943 TELO2Q9Y4R8 837 aa21.14■□□□□ 0.97
PSPC1-202ENST00000427943 SPDYE3A6NKU9 549 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 NAPAP54920 295 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 APOBRQ0VD83 1088 aa21.13■□□□□ 0.97
PSPC1-202ENST00000427943 RAB30Q15771 203 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms