RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 GPKOWQ92917 476 aaPredicted RBP eCLIP11.86□□□□□ -0.51
HDLBP-213ENST00000427007 WNT8BQ93098 351 aa11.86□□□□□ -0.51
HDLBP-213ENST00000427007 EMID1Q96A84 441 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-213ENST00000427007 UHRF1Q96T88 793 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-213ENST00000427007 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
HDLBP-213ENST00000427007 TSPYL2Q9H2G4 693 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-213ENST00000427007 MTCH2Q9Y6C9 303 aa11.86□□□□□ -0.51
HDLBP-213ENST00000427007 TAF6LQ9Y6J9 622 aa11.86□□□□□ -0.51
HDLBP-213ENST00000427007 DOCK5Q9H7D0 1870 aa11.86□□□□□ -0.51
HDLBP-213ENST00000427007 MYO9BQ13459 2157 aa11.86□□□□□ -0.51
HDLBP-213ENST00000427007 TCF20Q9UGU0 1960 aaKnown RBP11.85□□□□□ -0.51
HDLBP-213ENST00000427007 LCHNA4D1U4 455 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 HAS3O00219 553 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 IFIT3O14879 490 aaKnown RBP11.85□□□□□ -0.51
HDLBP-213ENST00000427007 GGPS1O95749 300 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 SP2Q02086 613 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 GHRHRQ02643 423 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 HIC1Q14526 733 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 GRM4Q14833 912 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 CNKSR3Q6P9H4 555 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 STOX1Q6ZVD7 989 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 PIBF1Q8WXW3 757 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 SPATA33Q96N06 139 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 RIOX1Q9H6W3 641 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 MAP3K20Q9NYL2 800 aaKnown RBP11.85□□□□□ -0.51
HDLBP-213ENST00000427007 TRANK1O15050 2925 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 XIRP2A4UGR9 3374 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 MUC3AQ02505 3323 aa11.85□□□□□ -0.51
HDLBP-213ENST00000427007 ERICH2A1L162 156 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 E7EWF7 191 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 GCOM1H8Y6P7 765 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-213ENST00000427007 CYTH3O43739 400 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 POLR2MP0CAP2 368 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 UBA1P22314 1058 aaKnown RBP11.84□□□□□ -0.51
HDLBP-213ENST00000427007 CHMLP26374 656 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 CCND2P30279 289 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 KCNQ1P51787 676 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 RBL2Q08999 1139 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 PTK7Q13308 1070 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 WTAPQ15007 396 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 CELF3Q5SZQ8 465 aaKnown RBP11.84□□□□□ -0.51
HDLBP-213ENST00000427007 ZNF618Q5T7W0 954 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 RALYLQ86SE5 291 aaKnown RBP11.84□□□□□ -0.51
HDLBP-213ENST00000427007 VSIG10LQ86VR7 867 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 NECAB3Q96P71 396 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-213ENST00000427007 ZBED2Q9BTP6 218 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 MLXIPQ9HAP2 919 aa11.84□□□□□ -0.51
HDLBP-213ENST00000427007 SUPT16HQ9Y5B9 1047 aaKnown RBP11.84□□□□□ -0.51
HDLBP-213ENST00000427007 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-213ENST00000427007 PPFIA4O75335 1185 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 CXCL10P02778 98 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 POU3F3P20264 500 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-213ENST00000427007 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-213ENST00000427007 GRB10Q13322 594 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 MBTPS1Q14703 1052 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 TRIM71Q2Q1W2 868 aaKnown RBP11.83□□□□□ -0.52
HDLBP-213ENST00000427007 FAM117BQ6P1L5 589 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 KCNV1Q6PIU1 500 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 TRAF7Q6Q0C0 670 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 NCOA7Q8NI08 942 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 BCAS3Q9H6U6 928 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 MTUS1Q9ULD2 1270 aa11.83□□□□□ -0.52
HDLBP-213ENST00000427007 BAZ2BQ9UIF8 2168 aaKnown RBP11.82□□□□□ -0.52
HDLBP-213ENST00000427007 SIP14410 1827 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 PNMA6FA0A0J9YX94 578 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 PARNO95453 639 aaKnown RBP11.82□□□□□ -0.52
HDLBP-213ENST00000427007 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-213ENST00000427007 HOXD8P13378 290 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-213ENST00000427007 BMP1P13497 986 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 ANTXR2P58335 489 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 TROAPQ12815 778 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 IKBKEQ14164 716 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 SART3Q15020 963 aaKnown RBP11.82□□□□□ -0.52
HDLBP-213ENST00000427007 SAMD3Q8N6K7 520 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 GDPD5Q8WTR4 605 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 C16orf70Q9BSU1 422 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 RTEL1Q9NZ71 1219 aa11.82□□□□□ -0.52
HDLBP-213ENST00000427007 MICAL3Q7RTP6 2002 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 ABHD14A-ACY1A0A1B0GW23 586 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 C17orf102A2RUQ5 167 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 H3BRB1 525 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 LPXNO60711 386 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 GJB5O95377 273 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 LGALS2P05162 132 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 TGFB3P10600 412 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 COL9A1P20849 921 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 THPOP40225 353 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 MRPS9P82933 396 aaKnown RBP11.81□□□□□ -0.52
HDLBP-213ENST00000427007 TRAF1Q13077 416 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 AAK1Q2M2I8 961 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 GNPTABQ3T906 1256 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDLBP-213ENST00000427007 CATIPQ7Z7H3 387 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 ATP6V0A1Q93050 837 aa11.81□□□□□ -0.52
HDLBP-213ENST00000427007 TUT1Q9H6E5 874 aaKnown RBP11.81□□□□□ -0.52
HDLBP-213ENST00000427007 PRRC2BQ5JSZ5 2229 aaKnown RBP11.8□□□□□ -0.52
HDLBP-213ENST00000427007 RSPH10B2B2RC85 870 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms