RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 PGM5Q15124 567 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 DGKDQ16760 1214 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 TRIM71Q2Q1W2 868 aaKnown RBP11.67□□□□□ -0.54
GACAT3-201ENST00000426539 TMEM67Q5HYA8 995 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 VSIG10LQ86VR7 867 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 HOMER1Q86YM7 354 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 PPTC7Q8NI37 304 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 CAGE1Q8TC20 777 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 PHOSPHO2Q8TCD6 241 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 SLC9A7Q96T83 725 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
GACAT3-201ENST00000426539 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 MAP3K20Q9NYL2 800 aaKnown RBP11.67□□□□□ -0.54
GACAT3-201ENST00000426539 GBF1Q92538 1859 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 SGSM2O43147 1006 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 NBNO60934 754 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 CKBP12277 381 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 SELPP16109 830 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 IRX6P78412 446 aaPredicted RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 ZNF200P98182 395 aaPredicted RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 TAP1Q03518 808 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 TRDNQ13061 729 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 COL9A3Q14050 684 aaPredicted RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 MFSD10Q14728 455 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 KIAA0753Q2KHM9 967 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 HSDL1Q3SXM5 330 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 CELF3Q5SZQ8 465 aaKnown RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 MYSM1Q5VVJ2 828 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 LRRC8DQ7L1W4 858 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 SPRED2Q7Z698 418 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 TMCO2Q7Z6W1 182 aaPredicted RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 HERC6Q8IVU3 1022 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 DHX37Q8IY37 1157 aaKnown RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 MB21D2Q8IYB1 491 aaPredicted RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 SAMD3Q8N6K7 520 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 IGDCC4Q8TDY8 1250 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 AFAP1L1Q8TED9 768 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 ATXN2LQ8WWM7 1075 aaKnown RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 SYMPKQ92797 1274 aaKnown RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 ASB2Q96Q27 587 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 ALG1Q9BT22 464 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 CERS4Q9HA82 394 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 THEGQ9P2T0 379 aa11.66□□□□□ -0.54
GACAT3-201ENST00000426539 SPTBN5Q9NRC6 3674 aaKnown RBP11.66□□□□□ -0.54
GACAT3-201ENST00000426539 PNMA6FA0A0J9YX94 578 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 GCOM1H8Y6P7 765 aaPredicted RBP11.65□□□□□ -0.54
GACAT3-201ENST00000426539 BAIAP3O94812 1187 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 GGPS1O95749 300 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 CXCL10P02778 98 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 POLR2MP0CAP2 368 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 UBA1P22314 1058 aaKnown RBP11.65□□□□□ -0.54
GACAT3-201ENST00000426539 WDR5P61964 334 aaKnown RBP11.65□□□□□ -0.54
GACAT3-201ENST00000426539 MBTPS1Q14703 1052 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 WTAPQ15007 396 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 FCHSD1Q86WN1 690 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 CCDC155Q8N6L0 562 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 C7orf31Q8N865 590 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 NCOA7Q8NI08 942 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 MAP4K1Q92918 833 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 SPATA33Q96N06 139 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 C16orf70Q9BSU1 422 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 MTCH2Q9Y6C9 303 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 TANC1Q9C0D5 1861 aa11.65□□□□□ -0.54
GACAT3-201ENST00000426539 TET1Q8NFU7 2136 aa11.65□□□□□ -0.55
GACAT3-201ENST00000426539 CHD7Q9P2D1 2997 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 FRMPD4Q14CM0 1322 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 LCHNA4D1U4 455 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 PPFIA4O75335 1185 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 POU3F3P20264 500 aaPredicted RBP11.64□□□□□ -0.55
GACAT3-201ENST00000426539 DEFB103AP81534 67 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 MRPS9P82933 396 aaKnown RBP11.64□□□□□ -0.55
GACAT3-201ENST00000426539 SEMA3FQ13275 785 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 PTK7Q13308 1070 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 ZNF618Q5T7W0 954 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 KRT40Q6A162 431 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 RALYLQ86SE5 291 aaKnown RBP11.64□□□□□ -0.55
GACAT3-201ENST00000426539 PIBF1Q8WXW3 757 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 MYL10Q9BUA6 226 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 KATNAL1Q9BW62 490 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 TELO2Q9Y4R8 837 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 PCDHB13Q9Y5F0 798 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 RBM8AQ9Y5S9 174 aaKnown RBP11.64□□□□□ -0.55
GACAT3-201ENST00000426539 KIAA1217Q5T5P2 1943 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 TTC28Q96AY4 2481 aa11.64□□□□□ -0.55
GACAT3-201ENST00000426539 MYO9BQ13459 2157 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 ERICH2A1L162 156 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 MAP3K13O43283 966 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 LPXNO60711 386 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 TGFB3P10600 412 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 CCND2P30279 289 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 HOXC8P31273 242 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 MRPS5P82675 430 aaKnown RBP11.63□□□□□ -0.55
GACAT3-201ENST00000426539 CNKSR3Q6P9H4 555 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 KCNV1Q6PIU1 500 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 MICALL1Q8N3F8 863 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 ARNTL2Q8WYA1 636 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 LY9Q9HBG7 655 aa11.63□□□□□ -0.55
GACAT3-201ENST00000426539 SPATA31C2B4DYI2 1134 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms