RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 FAM86B2P0C5J1 330 aa27.88■■■□□ 2.05
VEGFA-209ENST00000425836 CIITAP33076 1130 aa27.88■■■□□ 2.05
VEGFA-209ENST00000425836 GJA9P57773 515 aa27.88■■■□□ 2.05
VEGFA-209ENST00000425836 IRX5P78411 483 aaPredicted RBP27.88■■■□□ 2.05
VEGFA-209ENST00000425836 INF2Q27J81 1249 aa27.88■■■□□ 2.05
VEGFA-209ENST00000425836 LARP1BQ659C4 914 aaKnown RBP27.88■■■□□ 2.05
VEGFA-209ENST00000425836 UPF3AQ9H1J1 476 aaKnown RBP27.88■■■□□ 2.05
VEGFA-209ENST00000425836 FAM205CA6NFA0 338 aa27.87■■■□□ 2.05
VEGFA-209ENST00000425836 MTMR1Q13613 665 aa27.87■■■□□ 2.05
VEGFA-209ENST00000425836 LRRC41Q15345 812 aa27.87■■■□□ 2.05
VEGFA-209ENST00000425836 AP5M1Q9H0R1 490 aa27.87■■■□□ 2.05
VEGFA-209ENST00000425836 FOXP1Q9H334 677 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-209ENST00000425836 CTAGE5O15320 804 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 NKX3-2P78367 333 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 ARRDC4Q8NCT1 418 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 CDHR1Q96JP9 859 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 MYADML2A6NDP7 307 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 MAFGO15525 162 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 MYCNP04198 464 aaPredicted RBP27.86■■■□□ 2.05
VEGFA-209ENST00000425836 ARP10275 920 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 UBA1P22314 1058 aaKnown RBP27.86■■■□□ 2.05
VEGFA-209ENST00000425836 MNX1P50219 401 aaPredicted RBP27.86■■■□□ 2.05
VEGFA-209ENST00000425836 NIPA1Q7RTP0 329 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 KLHDC9Q8NEP7 349 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 OR6J1Q8NGC5 347 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 SPC25Q9HBM1 224 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 KCNH7Q9NS40 1196 aa27.86■■■□□ 2.05
VEGFA-209ENST00000425836 IGLV3-22A0A075B6J6 115 aa27.85■■■□□ 2.05
VEGFA-209ENST00000425836 H3BQV1 296 aa27.85■■■□□ 2.05
VEGFA-209ENST00000425836 GH1P01241 217 aa27.85■■■□□ 2.05
VEGFA-209ENST00000425836 C6orf222P0C671 652 aaPredicted RBP27.85■■■□□ 2.05
VEGFA-209ENST00000425836 IFFO2Q5TF58 517 aa27.85■■■□□ 2.05
VEGFA-209ENST00000425836 RNF180Q86T96 592 aa27.85■■■□□ 2.05
VEGFA-209ENST00000425836 ANKLE1Q8NAG6 615 aa27.85■■■□□ 2.05
VEGFA-209ENST00000425836 BCAS3Q9H6U6 928 aa27.85■■■□□ 2.05
VEGFA-209ENST00000425836 KIF28PB7ZC32 967 aa27.84■■■□□ 2.05
VEGFA-209ENST00000425836 ATP9AO75110 1047 aa27.84■■■□□ 2.05
VEGFA-209ENST00000425836 ARHGAP1Q07960 439 aa27.84■■■□□ 2.05
VEGFA-209ENST00000425836 CELF3Q5SZQ8 465 aaKnown RBP27.84■■■□□ 2.05
VEGFA-209ENST00000425836 NEK8Q86SG6 692 aa27.84■■■□□ 2.05
VEGFA-209ENST00000425836 PLA2G4DQ86XP0 818 aa27.84■■■□□ 2.05
VEGFA-209ENST00000425836 SENP7Q9BQF6 1050 aa27.84■■■□□ 2.05
VEGFA-209ENST00000425836 GGPS1O95749 300 aa27.83■■■□□ 2.05
VEGFA-209ENST00000425836 HSP90AA1P07900 732 aaKnown RBP27.83■■■□□ 2.05
VEGFA-209ENST00000425836 BEX3Q00994 111 aa27.83■■■□□ 2.05
VEGFA-209ENST00000425836 LETM2Q2VYF4 491 aa27.83■■■□□ 2.05
VEGFA-209ENST00000425836 DHX37Q8IY37 1157 aaKnown RBP27.83■■■□□ 2.05
VEGFA-209ENST00000425836 KIAA0100Q14667 2235 aaKnown RBP27.82■■■□□ 2.04
VEGFA-209ENST00000425836 CYP3A7-CYP3A51PA0A087WV96 503 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 DNM1LO00429 736 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 SORBS3O60504 671 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 TDP2O95551 362 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 KCNA2P16389 499 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 PDCP20941 246 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 CYP3A7P24462 503 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 U2AF2P26368 475 aaKnown RBP eCLIP27.82■■■□□ 2.042e-48■□□□□ 11.2
VEGFA-209ENST00000425836 CST5P28325 142 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-209ENST00000425836 NEDD9Q14511 834 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 FSCN1Q16658 493 aaKnown RBP27.82■■■□□ 2.04
VEGFA-209ENST00000425836 PRR16Q569H4 304 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 GNASQ5JWF2 1037 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 MYSM1Q5VVJ2 828 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 CCSAPQ6IQ19 270 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-209ENST00000425836 EMID1Q96A84 441 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-209ENST00000425836 LENG9Q96B70 501 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 AGO4Q9HCK5 861 aaKnown RBP27.82■■■□□ 2.04
VEGFA-209ENST00000425836 LAMC2Q13753 1193 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 GNL2Q13823 731 aaKnown RBP27.82■■■□□ 2.04
VEGFA-209ENST00000425836 MOXD1Q6UVY6 613 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 NOSTRINQ8IVI9 506 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 SPRYD3Q8NCJ5 442 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 DIS3LQ8TF46 1054 aaKnown RBP27.82■■■□□ 2.04
VEGFA-209ENST00000425836 MBOAT7Q96N66 472 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 PKD2L1Q9P0L9 805 aa27.82■■■□□ 2.04
VEGFA-209ENST00000425836 SYT1P21579 422 aa27.81■■■□□ 2.04
VEGFA-209ENST00000425836 SETQ01105 290 aaPredicted RBP27.81■■■□□ 2.04
VEGFA-209ENST00000425836 KCNA10Q16322 511 aa27.81■■■□□ 2.04
VEGFA-209ENST00000425836 CYFIP1Q7L576 1253 aa27.81■■■□□ 2.04
VEGFA-209ENST00000425836 AFG1LQ8WV93 481 aa27.81■■■□□ 2.04
VEGFA-209ENST00000425836 KBTBD13C9JR72 458 aa27.8■■■□□ 2.04
VEGFA-209ENST00000425836 CAPN15O75808 1086 aa27.8■■■□□ 2.04
VEGFA-209ENST00000425836 FARP2O94887 1054 aaPredicted RBP27.8■■■□□ 2.04
VEGFA-209ENST00000425836 BECN1Q14457 450 aa27.8■■■□□ 2.04
VEGFA-209ENST00000425836 Q4G0T1 1027 aa27.8■■■□□ 2.04
VEGFA-209ENST00000425836 MCTP1Q6DN14 999 aa27.8■■■□□ 2.04
VEGFA-209ENST00000425836 PPP4R3AQ6IN85 833 aa27.8■■■□□ 2.04
VEGFA-209ENST00000425836 UBE2Q1Q7Z7E8 422 aa27.8■■■□□ 2.04
VEGFA-209ENST00000425836 MLXIPQ9HAP2 919 aa27.8■■■□□ 2.04
VEGFA-209ENST00000425836 A6NJR5 290 aa27.79■■■□□ 2.04
VEGFA-209ENST00000425836 METTL7BQ6UX53 244 aa27.79■■■□□ 2.04
VEGFA-209ENST00000425836 PCSK9Q8NBP7 692 aaKnown RBP27.79■■■□□ 2.04
VEGFA-209ENST00000425836 GIMAP8Q8ND71 665 aaPredicted RBP27.79■■■□□ 2.04
VEGFA-209ENST00000425836 SPATA33Q96N06 139 aa27.79■■■□□ 2.04
VEGFA-209ENST00000425836 TSEN34Q9BSV6 310 aaKnown RBP27.79■■■□□ 2.04
VEGFA-209ENST00000425836 KIAA1217Q5T5P2 1943 aa27.78■■■□□ 2.04
VEGFA-209ENST00000425836 CCNT1O60563 726 aaKnown RBP27.78■■■□□ 2.04
VEGFA-209ENST00000425836 CPT1AP50416 773 aa27.78■■■□□ 2.04
VEGFA-209ENST00000425836 ITGB3BPQ13352 177 aaPredicted RBP27.78■■■□□ 2.04
VEGFA-209ENST00000425836 PAWRQ96IZ0 340 aaKnown RBP27.78■■■□□ 2.04
VEGFA-209ENST00000425836 UIMC1Q96RL1 719 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms