RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 CCNE1P24864 410 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 C2orf54Q08AI8 447 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 TCP10Q12799 353 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 ADGRF4Q8IZF3 695 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 OTUD6BQ8N6M0 293 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 ANKRD13CQ8N6S4 541 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 SNX29Q8TEQ0 813 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 JAKMIP2Q96AA8 810 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 HAUS4Q9H6D7 363 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 FAM204AQ9H8W3 233 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
COL12A1-205ENST00000425443 LY75O60449 1722 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 CCDC189A1A4V9 331 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 TTBK2Q6IQ55 1244 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 TANGO6Q9C0B7 1094 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 SMARCAL1Q9NZC9 954 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 TBC1D7Q9P0N9 293 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 THSD7AQ9UPZ6 1657 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 ESYT2A0FGR8 921 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 MYO1CO00159 1063 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 MRPL12P52815 198 aaKnown RBP14.39□□□□□ -0.11
COL12A1-205ENST00000425443 DNAJC14Q6Y2X3 702 aaPredicted RBP14.39□□□□□ -0.11
COL12A1-205ENST00000425443 KRT27Q7Z3Y8 459 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 CERS5Q8N5B7 392 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 HDAC7Q8WUI4 952 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 MMRN2Q9H8L6 949 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 KANSL2Q9H9L4 492 aa14.39□□□□□ -0.11
COL12A1-205ENST00000425443 PNMA6FA0A0J9YX94 578 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 PRPF6O94906 941 aaKnown RBP14.38□□□□□ -0.11
COL12A1-205ENST00000425443 ALDH1B1P30837 517 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 LRRC31Q6UY01 552 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 CUL5Q93034 780 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 C7orf25Q9BPX7 421 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 DBNDD1Q9H9R9 158 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 EHD2Q9NZN4 543 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 HPCAL4Q9UM19 191 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 SUGT1Q9Y2Z0 365 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 FAM170AA1A519 330 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 SLC37A4O43826 429 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 RNF40O75150 1001 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 PPP1R2P41236 205 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 ZNF543Q08ER8 600 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 IKQ13123 557 aaPredicted RBP14.38□□□□□ -0.11
COL12A1-205ENST00000425443 KIAA0825Q8IV33 1275 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 MSL3Q8N5Y2 521 aaKnown RBP14.38□□□□□ -0.11
COL12A1-205ENST00000425443 KIAA0895Q8NCT3 520 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 LARP4BQ92615 738 aaKnown RBP14.38□□□□□ -0.11
COL12A1-205ENST00000425443 CAPN6Q9Y6Q1 641 aa14.38□□□□□ -0.11
COL12A1-205ENST00000425443 EIF3JO75822 258 aaKnown RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 CXCR5P32302 372 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 CACNB3P54284 484 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 CDC42EP5Q6NZY7 148 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 SRLQ86TD4 932 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 NLGN1Q8N2Q7 840 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 CCDC155Q8N6L0 562 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 GLIS3Q8NEA6 775 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 MMTAG2Q9BU76 263 aaKnown RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 DEF6Q9H4E7 631 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 PSTPIP2Q9H939 334 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 JMJD4Q9H9V9 463 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 MLXIPQ9HAP2 919 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 AGPSO00116 658 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 ONECUT3O60422 494 aaPredicted RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 NPR1P16066 1061 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 C2CD5Q86YS7 1000 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 FAM71BQ8TC56 605 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 DDX25Q9UHL0 483 aaKnown RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 DDX60LQ5H9U9 1706 aaKnown RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 FAM196BA6NMK8 535 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 USP17L10C9JJH3 530 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 NAP1L1P55209 391 aaKnown RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 GABPAQ06546 454 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 ORC2Q13416 577 aaPredicted RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 GPATCH4Q5T3I0 446 aaKnown RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 RPAINQ86UA6 219 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 COG1Q8WTW3 980 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 PURBQ96QR8 312 aaKnown RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 ZHX3Q9H4I2 956 aa14.37□□□□□ -0.11
COL12A1-205ENST00000425443 RRP15Q9Y3B9 282 aaKnown RBP14.37□□□□□ -0.11
COL12A1-205ENST00000425443 HSP90B2PQ58FF3 399 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 RABEP2Q9H5N1 569 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 STK17AQ9UEE5 414 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 HSPA1LP34931 641 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 GGCXP38435 758 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 SLC1A4P43007 532 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 NFIAQ12857 509 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 GRB10Q13322 594 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 CCDC42Q96M95 316 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 NUP58Q9BVL2 599 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 ARHGAP20Q9P2F6 1191 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
COL12A1-205ENST00000425443 UTRNP46939 3433 aa14.35□□□□□ -0.11
COL12A1-205ENST00000425443 MYMKA6NI61 221 aa14.35□□□□□ -0.11
COL12A1-205ENST00000425443 SHMT1P34896 483 aa14.35□□□□□ -0.11
COL12A1-205ENST00000425443 CYLC1P35663 651 aaPredicted RBP14.35□□□□□ -0.11
COL12A1-205ENST00000425443 PDE6BP35913 854 aa14.35□□□□□ -0.11
COL12A1-205ENST00000425443 ARID5AQ03989 594 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms