RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 LRRC10BA6NIK2 292 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 ATP2A1O14983 1001 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 NRDCO43847 1150 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 ALAS1P13196 640 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 DSG3P32926 999 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 HMGCS2P54868 508 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 PPP2R5CQ13362 524 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 ECM1Q16610 540 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 FILIP1LQ4L180 1135 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 CACTINQ8WUQ7 758 aaKnown RBP18.76■□□□□ 0.59
SSBP3-205ENST00000417664 GJA10Q969M2 543 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 NAP1L5Q96NT1 182 aaPredicted RBP18.76■□□□□ 0.59
SSBP3-205ENST00000417664 WDR11Q9BZH6 1224 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 KIAA1024Q9UPX6 916 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 POLR2AP24928 1970 aaKnown RBP18.76■□□□□ 0.59
SSBP3-205ENST00000417664 PARP14Q460N5 1801 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 NFIBO00712 420 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 NCAPH2Q6IBW4 605 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 FOXR2Q6PJQ5 311 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 KCNK18Q7Z418 384 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 DDX12PQ92771 950 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 HOXC10Q9NYD6 342 aa18.76■□□□□ 0.59
SSBP3-205ENST00000417664 PSMD10O75832 226 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 PLA2G4BP0C869 781 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 CCNE1P24864 410 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 IREB2P48200 963 aaKnown RBP18.75■□□□□ 0.59
SSBP3-205ENST00000417664 NR1I3Q14994 352 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 TKFCQ3LXA3 575 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 LRCH2Q5VUJ6 765 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 CATSPERGQ6ZRH7 1159 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 OTOP1Q7RTM1 612 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 CATSPER3Q86XQ3 398 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 CYP2W1Q8TAV3 490 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 RIT2Q99578 217 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 MXRA8Q9BRK3 442 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 THAP9Q9H5L6 903 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 TUFT1Q9NNX1 390 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 SPTLC3Q9NUV7 552 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 LIMA1Q9UHB6 759 aaKnown RBP18.75■□□□□ 0.59
SSBP3-205ENST00000417664 DNM3Q9UQ16 869 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 CSADQ9Y600 493 aa18.75■□□□□ 0.59
SSBP3-205ENST00000417664 POTEB3A0JP26 581 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 POTECB2RU33 542 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 MED24O75448 989 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 SFPQP23246 707 aaKnown RBP eCLIP18.74■□□□□ 0.59
SSBP3-205ENST00000417664 NF2P35240 595 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 EHHADHQ08426 723 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 DGKZQ13574 1117 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 PCNX4Q63HM2 1172 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 XRRA1Q6P2D8 792 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 POTEBQ6S5H4 581 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.74■□□□□ 0.59
SSBP3-205ENST00000417664 REPS2Q8NFH8 660 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 SYTL5Q8TDW5 730 aaPredicted RBP18.74■□□□□ 0.59
SSBP3-205ENST00000417664 ATG4CQ96DT6 458 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 TRERF1Q96PN7 1200 aa18.74■□□□□ 0.59
SSBP3-205ENST00000417664 RBBP6Q7Z6E9 1792 aaKnown RBP18.74■□□□□ 0.59
SSBP3-205ENST00000417664 SPATA31C1P0DKV0 1188 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 STAT3P40763 770 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 STK4Q13043 487 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 VGLL4Q14135 290 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.59
SSBP3-205ENST00000417664 SPECC1LQ69YQ0 1117 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 APTXQ7Z2E3 356 aaKnown RBP18.73■□□□□ 0.59
SSBP3-205ENST00000417664 CCDC65Q8IXS2 484 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 GUF1Q8N442 669 aaKnown RBP18.73■□□□□ 0.59
SSBP3-205ENST00000417664 P2RX5Q93086 422 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 DNAJC19Q96DA6 116 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 INTS13Q9NVM9 706 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 ADD3Q9UEY8 706 aaKnown RBP18.73■□□□□ 0.59
SSBP3-205ENST00000417664 SNCAIPQ9Y6H5 919 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 GAS7O60861 476 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 EEF1GP26641 437 aaKnown RBP18.73■□□□□ 0.59
SSBP3-205ENST00000417664 LRMPQ12912 555 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 MUM1L1Q5H9M0 696 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 TTI2Q6NXR4 508 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 EIF2AK1Q9BQI3 630 aaKnown RBP18.73■□□□□ 0.59
SSBP3-205ENST00000417664 ZNF577Q9BSK1 485 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 PYCARDQ9ULZ3 195 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 MAPK8IP1Q9UQF2 711 aa18.73■□□□□ 0.59
SSBP3-205ENST00000417664 RLFQ13129 1914 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 E9PMD0 336 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 SLC12A3P55017 1021 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 RPS6P62753 249 aaKnown RBP18.72■□□□□ 0.59
SSBP3-205ENST00000417664 HSP90AA4PQ58FG1 418 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 TCP11X2Q5H9J9 407 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.72■□□□□ 0.59
SSBP3-205ENST00000417664 RNF207Q6ZRF8 634 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 DYMQ7RTS9 669 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 FAM114A1Q8IWE2 563 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 SYT2Q8N9I0 419 aaPredicted RBP18.72■□□□□ 0.59
SSBP3-205ENST00000417664 KIAA0895Q8NCT3 520 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 CCDC112Q8NEF3 446 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 NEK9Q8TD19 979 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 TRIM47Q96LD4 638 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 HSD17B14Q9BPX1 270 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 TEKT3Q9BXF9 490 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 COL20A1Q9P218 1284 aa18.72■□□□□ 0.59
SSBP3-205ENST00000417664 FZD1Q9UP38 647 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms