RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 HSDL1Q3SXM5 330 aa25.22■■□□□ 1.63
ACTB-203ENST00000417101 GPKOWQ92917 476 aaPredicted RBP eCLIP25.22■■□□□ 1.63
ACTB-203ENST00000417101 TET1Q8NFU7 2136 aa25.21■■□□□ 1.63
ACTB-203ENST00000417101 PPFIA4O75335 1185 aa25.21■■□□□ 1.63
ACTB-203ENST00000417101 CA3P07451 260 aa25.21■■□□□ 1.63
ACTB-203ENST00000417101 TGFB3P10600 412 aa25.21■■□□□ 1.63
ACTB-203ENST00000417101 HOXD8P13378 290 aaPredicted RBP25.21■■□□□ 1.63
ACTB-203ENST00000417101 UBA1P22314 1058 aaKnown RBP25.21■■□□□ 1.63
ACTB-203ENST00000417101 LRRC8DQ7L1W4 858 aa25.21■■□□□ 1.63
ACTB-203ENST00000417101 PHOSPHO2Q8TCD6 241 aa25.21■■□□□ 1.63
ACTB-203ENST00000417101 SYMPKQ92797 1274 aaKnown RBP25.21■■□□□ 1.63
ACTB-203ENST00000417101 MYL10Q9BUA6 226 aa25.21■■□□□ 1.63
ACTB-203ENST00000417101 LY9Q9HBG7 655 aa25.21■■□□□ 1.63
ACTB-203ENST00000417101 CKBP12277 381 aa25.2■■□□□ 1.62
ACTB-203ENST00000417101 RBL2Q08999 1139 aa25.2■■□□□ 1.62
ACTB-203ENST00000417101 GPNMBQ14956 572 aa25.2■■□□□ 1.62
ACTB-203ENST00000417101 TJAP1Q5JTD0 557 aa25.2■■□□□ 1.62
ACTB-203ENST00000417101 HERC6Q8IVU3 1022 aa25.2■■□□□ 1.62
ACTB-203ENST00000417101 ZNF654Q8IZM8 581 aa25.2■■□□□ 1.62
ACTB-203ENST00000417101 CTCFLQ8NI51 663 aaPredicted RBP25.2■■□□□ 1.62
ACTB-203ENST00000417101 TRIP12Q14669 1992 aaPredicted RBP25.2■■□□□ 1.62
ACTB-203ENST00000417101 TRANK1O15050 2925 aa25.19■■□□□ 1.62
ACTB-203ENST00000417101 PRC1O43663 620 aa25.19■■□□□ 1.62
ACTB-203ENST00000417101 BAIAP3O94812 1187 aa25.19■■□□□ 1.62
ACTB-203ENST00000417101 ZNF200P98182 395 aaPredicted RBP25.19■■□□□ 1.62
ACTB-203ENST00000417101 CASC1Q6TDU7 716 aa25.19■■□□□ 1.62
ACTB-203ENST00000417101 MAP3K14Q99558 947 aa25.19■■□□□ 1.62
ACTB-203ENST00000417101 MLXIPQ9HAP2 919 aa25.19■■□□□ 1.62
ACTB-203ENST00000417101 MYH7BA7E2Y1 1941 aa25.19■■□□□ 1.62
ACTB-203ENST00000417101 DDAH1O94760 285 aa25.18■■□□□ 1.62
ACTB-203ENST00000417101 KIF5BP33176 963 aa25.18■■□□□ 1.62
ACTB-203ENST00000417101 KCNJ6P48051 423 aa25.18■■□□□ 1.62
ACTB-203ENST00000417101 PTK7Q13308 1070 aa25.18■■□□□ 1.62
ACTB-203ENST00000417101 RRP36Q96EU6 259 aaKnown RBP25.18■■□□□ 1.62
ACTB-203ENST00000417101 SPZ1Q9BXG8 430 aa25.18■■□□□ 1.62
ACTB-203ENST00000417101 LSG1Q9H089 658 aaKnown RBP25.18■■□□□ 1.62
ACTB-203ENST00000417101 BCAS3Q9H6U6 928 aa25.18■■□□□ 1.62
ACTB-203ENST00000417101 CERS4Q9HA82 394 aa25.18■■□□□ 1.62
ACTB-203ENST00000417101 KIF28PB7ZC32 967 aa25.17■■□□□ 1.62
ACTB-203ENST00000417101 PARNO95453 639 aaKnown RBP25.17■■□□□ 1.62
ACTB-203ENST00000417101 MRPS9P82933 396 aaKnown RBP25.17■■□□□ 1.62
ACTB-203ENST00000417101 HIC1Q14526 733 aa25.17■■□□□ 1.62
ACTB-203ENST00000417101 GNPTABQ3T906 1256 aa25.17■■□□□ 1.62
ACTB-203ENST00000417101 NFXL1Q6ZNB6 911 aa25.17■■□□□ 1.62
ACTB-203ENST00000417101 WNT8BQ93098 351 aa25.17■■□□□ 1.62
ACTB-203ENST00000417101 THEGQ9P2T0 379 aa25.17■■□□□ 1.62
ACTB-203ENST00000417101 FRMPD4Q14CM0 1322 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 REV3LO60673 3130 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 RFXAPO00287 272 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 NBNO60934 754 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 CXCL10P02778 98 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 MCM5P33992 734 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 WDR5P61964 334 aaKnown RBP25.16■■□□□ 1.62
ACTB-203ENST00000417101 COL9A3Q14050 684 aaPredicted RBP25.16■■□□□ 1.62
ACTB-203ENST00000417101 TRIM71Q2Q1W2 868 aaKnown RBP25.16■■□□□ 1.62
ACTB-203ENST00000417101 CNKSR3Q6P9H4 555 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 MICALL1Q8N3F8 863 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 INPP4AQ96PE3 977 aaPredicted RBP25.16■■□□□ 1.62
ACTB-203ENST00000417101 C16orf70Q9BSU1 422 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 MTA3Q9BTC8 594 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 RTEL1Q9NZ71 1219 aa25.16■■□□□ 1.62
ACTB-203ENST00000417101 SH2B2O14492 632 aaPredicted RBP25.15■■□□□ 1.62
ACTB-203ENST00000417101 SLC27A2O14975 620 aa25.15■■□□□ 1.62
ACTB-203ENST00000417101 ARHGEF15O94989 841 aa25.15■■□□□ 1.62
ACTB-203ENST00000417101 TAP1Q03518 808 aa25.15■■□□□ 1.62
ACTB-203ENST00000417101 ZNF618Q5T7W0 954 aa25.15■■□□□ 1.62
ACTB-203ENST00000417101 USP17L6PQ6QN14 398 aa25.15■■□□□ 1.62
ACTB-203ENST00000417101 ATXN2LQ8WWM7 1075 aaKnown RBP25.15■■□□□ 1.62
ACTB-203ENST00000417101 ESYT1Q9BSJ8 1104 aa25.15■■□□□ 1.62
ACTB-203ENST00000417101 SEC63Q9UGP8 760 aaKnown RBP25.15■■□□□ 1.62
ACTB-203ENST00000417101 CCDC69A6NI79 296 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 RBAK-RBAKDNI3L0D1 243 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 NOP56O00567 594 aaKnown RBP25.14■■□□□ 1.62
ACTB-203ENST00000417101 TLL1O43897 1013 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 STAM2O75886 525 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 PLEKHA8P1O95397 391 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 SMARCA1P28370 1054 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 ICAM3P32942 547 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 TCTN1Q2MV58 587 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 TRAF7Q6Q0C0 670 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 TMCO2Q7Z6W1 182 aaPredicted RBP25.14■■□□□ 1.62
ACTB-203ENST00000417101 TMTC2Q8N394 836 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 SMARCC2Q8TAQ2 1214 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 CUL5Q93034 780 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 TMEM87BQ96K49 555 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 LZTS2Q9BRK4 669 aa25.14■■□□□ 1.62
ACTB-203ENST00000417101 MUC3AQ02505 3323 aa25.14■■□□□ 1.61
ACTB-203ENST00000417101 EPOPA6NHQ4 379 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 SPATA31C2B4DYI2 1134 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 H3BRB1 525 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 LGALS2P05162 132 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 RXRAP19793 462 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 GNAQP50148 359 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 DEFB103AP81534 67 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 SEMA3FQ13275 785 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 NEDD9Q14511 834 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 CREB3L3Q68CJ9 461 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 CYFIP1Q7L576 1253 aa25.13■■□□□ 1.61
ACTB-203ENST00000417101 CMTR1Q8N1G2 835 aaKnown RBP25.13■■□□□ 1.61
ACTB-203ENST00000417101 SRBD1Q8N5C6 995 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms