RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TRIM71Q2Q1W2 868 aaKnown RBP17.2■□□□□ 0.34
RPS28-201ENST00000417088 HSDL1Q3SXM5 330 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 CELF3Q5SZQ8 465 aaKnown RBP17.2■□□□□ 0.34
RPS28-201ENST00000417088 KCNV1Q6PIU1 500 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 ADAMTS19Q8TE59 1207 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 ARNTL2Q8WYA1 636 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
RPS28-201ENST00000417088 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
RPS28-201ENST00000417088 TRANK1O15050 2925 aa17.2■□□□□ 0.34
RPS28-201ENST00000417088 BAZ2BQ9UIF8 2168 aaKnown RBP17.19■□□□□ 0.34
RPS28-201ENST00000417088 GCOM1H8Y6P7 765 aaPredicted RBP17.19■□□□□ 0.34
RPS28-201ENST00000417088 CYTH3O43739 400 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 TLL1O43897 1013 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 SORBS3O60504 671 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 PARNO95453 639 aaKnown RBP17.19■□□□□ 0.34
RPS28-201ENST00000417088 GGPS1O95749 300 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 POLR2MP0CAP2 368 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 KCNJ6P48051 423 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 ZNF200P98182 395 aaPredicted RBP17.19■□□□□ 0.34
RPS28-201ENST00000417088 SP2Q02086 613 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 TCTN1Q2MV58 587 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 CNKSR3Q6P9H4 555 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 TRAF7Q6Q0C0 670 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 RUFY2Q8WXA3 655 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 WNT8BQ93098 351 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 ZFP91Q96JP5 570 aaPredicted RBP17.19■□□□□ 0.34
RPS28-201ENST00000417088 SPATA33Q96N06 139 aa17.19■□□□□ 0.34
RPS28-201ENST00000417088 MYH7BA7E2Y1 1941 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 ERICH2A1L162 156 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 E7EWF7 191 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 RBAK-RBAKDNI3L0D1 243 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 GTPBP6O43824 516 aaPredicted RBP17.18■□□□□ 0.34
RPS28-201ENST00000417088 TGFB3P10600 412 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 UBA1P22314 1058 aaKnown RBP17.18■□□□□ 0.34
RPS28-201ENST00000417088 DEFB103AP81534 67 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 TROAPQ12815 778 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 TRAF1Q13077 416 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 HIC1Q14526 733 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 WTAPQ15007 396 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 KRT40Q6A162 431 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 SPRED2Q7Z698 418 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 TMCO2Q7Z6W1 182 aaPredicted RBP17.18■□□□□ 0.34
RPS28-201ENST00000417088 FCHSD1Q86WN1 690 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 GPKOWQ92917 476 aaPredicted RBP eCLIP17.18■□□□□ 0.34
RPS28-201ENST00000417088 UHRF1Q96T88 793 aaPredicted RBP17.18■□□□□ 0.34
RPS28-201ENST00000417088 REV3LO60673 3130 aa17.18■□□□□ 0.34
RPS28-201ENST00000417088 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
RPS28-201ENST00000417088 LCHNA4D1U4 455 aa17.17■□□□□ 0.34
RPS28-201ENST00000417088 CCND2P30279 289 aa17.17■□□□□ 0.34
RPS28-201ENST00000417088 MBTPS1Q14703 1052 aa17.17■□□□□ 0.34
RPS28-201ENST00000417088 ZNF618Q5T7W0 954 aa17.17■□□□□ 0.34
RPS28-201ENST00000417088 RALYLQ86SE5 291 aaKnown RBP17.17■□□□□ 0.34
RPS28-201ENST00000417088 NCOA7Q8NI08 942 aa17.17■□□□□ 0.34
RPS28-201ENST00000417088 C16orf70Q9BSU1 422 aa17.17■□□□□ 0.34
RPS28-201ENST00000417088 SUPT16HQ9Y5B9 1047 aaKnown RBP17.17■□□□□ 0.34
RPS28-201ENST00000417088 PTPRSQ13332 1948 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 BDP1A6H8Y1 2624 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 ABHD14A-ACY1A0A1B0GW23 586 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 BMP1P13497 986 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 ANTXR2P58335 489 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 TFF2Q03403 129 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 GRB10Q13322 594 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 SKIV2LQ15477 1246 aaKnown RBP17.16■□□□□ 0.34
RPS28-201ENST00000417088 IL27Q8NEV9 243 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 ZBED2Q9BTP6 218 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 BCAS3Q9H6U6 928 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 MLXIPQ9HAP2 919 aa17.16■□□□□ 0.34
RPS28-201ENST00000417088 XIRP2A4UGR9 3374 aa17.15■□□□□ 0.34
RPS28-201ENST00000417088 SGSM2O43147 1006 aa17.15■□□□□ 0.34
RPS28-201ENST00000417088 LPXNO60711 386 aa17.15■□□□□ 0.34
RPS28-201ENST00000417088 MRPS9P82933 396 aaKnown RBP17.15■□□□□ 0.34
RPS28-201ENST00000417088 IKBKEQ14164 716 aa17.15■□□□□ 0.34
RPS28-201ENST00000417088 SART3Q15020 963 aaKnown RBP17.15■□□□□ 0.34
RPS28-201ENST00000417088 SERINC5Q86VE9 423 aa17.15■□□□□ 0.34
RPS28-201ENST00000417088 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
RPS28-201ENST00000417088 EFCAB14O75071 495 aa17.14■□□□□ 0.33
RPS28-201ENST00000417088 GJB5O95377 273 aa17.14■□□□□ 0.33
RPS28-201ENST00000417088 AAK1Q2M2I8 961 aa17.14■□□□□ 0.33
RPS28-201ENST00000417088 CATIPQ7Z7H3 387 aa17.14■□□□□ 0.33
RPS28-201ENST00000417088 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.33
RPS28-201ENST00000417088 PIBF1Q8WXW3 757 aa17.14■□□□□ 0.33
RPS28-201ENST00000417088 MAP4K1Q92918 833 aa17.14■□□□□ 0.33
RPS28-201ENST00000417088 NECAB3Q96P71 396 aaPredicted RBP17.14■□□□□ 0.33
RPS28-201ENST00000417088 INPP4AQ96PE3 977 aaPredicted RBP17.14■□□□□ 0.33
RPS28-201ENST00000417088 RAD9AQ99638 391 aa17.14■□□□□ 0.33
RPS28-201ENST00000417088 FRMPD4Q14CM0 1322 aa17.14■□□□□ 0.33
RPS28-201ENST00000417088 C17orf102A2RUQ5 167 aa17.13■□□□□ 0.33
RPS28-201ENST00000417088 H3BRB1 525 aa17.13■□□□□ 0.33
RPS28-201ENST00000417088 LGR5O75473 907 aa17.13■□□□□ 0.33
RPS28-201ENST00000417088 HOXC8P31273 242 aa17.13■□□□□ 0.33
RPS28-201ENST00000417088 ICAM3P32942 547 aa17.13■□□□□ 0.33
RPS28-201ENST00000417088 KCNQ1P51787 676 aa17.13■□□□□ 0.33
RPS28-201ENST00000417088 SEMA3FQ13275 785 aa17.13■□□□□ 0.33
RPS28-201ENST00000417088 GNPTABQ3T906 1256 aa17.13■□□□□ 0.33
RPS28-201ENST00000417088 TUT1Q9H6E5 874 aaKnown RBP17.13■□□□□ 0.33
RPS28-201ENST00000417088 COG5Q9UP83 839 aa17.13■□□□□ 0.33
RPS28-201ENST00000417088 TCF20Q9UGU0 1960 aaKnown RBP17.12■□□□□ 0.33
RPS28-201ENST00000417088 RSPH10B2B2RC85 870 aa17.12■□□□□ 0.33
RPS28-201ENST00000417088 SPATA31C2B4DYI2 1134 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms