RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 MYSM1Q5VVJ2 828 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 HEATR3Q7Z4Q2 680 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 RPUSD2Q8IZ73 545 aaKnown RBP13.37□□□□□ -0.27
LINC00963-201ENST00000412141 SAMD3Q8N6K7 520 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 C7orf31Q8N865 590 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 PPTC7Q8NI37 304 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 HERVK_113Q902F9 699 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 TIFAQ96CG3 184 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 MTA3Q9BTC8 594 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 FTOQ9C0B1 505 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC00963-201ENST00000412141 HDAC6Q9UBN7 1215 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 BRPF3Q9ULD4 1205 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 SCN10AQ9Y5Y9 1956 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 RABGGTBP53611 331 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 FGD1P98174 961 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
LINC00963-201ENST00000412141 MFSD10Q14728 455 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 GRIN2CQ14957 1233 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 KCNV1Q6PIU1 500 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 TMTC3Q6ZXV5 915 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 DHX32Q7L7V1 743 aaKnown RBP13.36□□□□□ -0.27
LINC00963-201ENST00000412141 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00963-201ENST00000412141 VWCEQ96DN2 955 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 MTIF3Q9H2K0 278 aaKnown RBP13.36□□□□□ -0.27
LINC00963-201ENST00000412141 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 PKD2L1Q9P0L9 805 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 KIAA1217Q5T5P2 1943 aa13.36□□□□□ -0.27
LINC00963-201ENST00000412141 KLF18A0A0U1RQI7 1052 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 MEIS2O14770 477 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 NEFLP07196 543 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 IQCF3P0C7M6 154 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 MYOGP15173 224 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 FOSL2P15408 326 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 SMARCA1P28370 1054 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 PTPN11Q06124 597 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-201ENST00000412141 BFSP2Q13515 415 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 APOA5Q6Q788 366 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 SGMS1Q86VZ5 419 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-201ENST00000412141 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-201ENST00000412141 NKX2-4Q9H2Z4 354 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 ZNF576Q9H609 170 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 MSRAQ9UJ68 235 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 TELO2Q9Y4R8 837 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 SLC4A7Q9Y6M7 1214 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 MYH7BA7E2Y1 1941 aa13.35□□□□□ -0.27
LINC00963-201ENST00000412141 GOLGA8AA7E2F4 631 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 GOLGA8BA8MQT2 603 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 SPATA31C2B4DYI2 1134 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 NOP56O00567 594 aaKnown RBP13.34□□□□□ -0.27
LINC00963-201ENST00000412141 ZBTB43O43298 467 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 PPFIA4O75335 1185 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 TGFB3P10600 412 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 RTN1Q16799 776 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 GNPTABQ3T906 1256 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 UTP14CQ5TAP6 766 aaKnown RBP13.34□□□□□ -0.27
LINC00963-201ENST00000412141 MAFAQ8NHW3 353 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-201ENST00000412141 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
LINC00963-201ENST00000412141 CTAGE1Q96RT6 745 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 V9GY48 417 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-201ENST00000412141 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
LINC00963-201ENST00000412141 F2P00734 622 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 ATP2A2P16615 1042 aaKnown RBP13.33□□□□□ -0.28
LINC00963-201ENST00000412141 NAPAP54920 295 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 APOBRQ0VD83 1088 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 HIC1Q14526 733 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 KRT32Q14532 448 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 PPM1EQ8WY54 764 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 DHX38Q92620 1227 aaKnown RBP13.33□□□□□ -0.28
LINC00963-201ENST00000412141 INPP4AQ96PE3 977 aaPredicted RBP13.33□□□□□ -0.28
LINC00963-201ENST00000412141 KATNAL1Q9BW62 490 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 GTF2IRD1Q9UHL9 959 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 YBX2Q9Y2T7 364 aaKnown RBP13.33□□□□□ -0.28
LINC00963-201ENST00000412141 SCN5AQ14524 2016 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 MUC3AQ02505 3323 aa13.33□□□□□ -0.28
LINC00963-201ENST00000412141 SPDYE3A6NKU9 549 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 H3BRB1 525 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 HAS3O00219 553 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 PIK3CDO00329 1044 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 FIBPO43427 364 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 ACTN1P12814 892 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 NEDD9Q14511 834 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 PCNX4Q63HM2 1172 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 WWC2Q6AWC2 1192 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 Q6ZUG5 572 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 NLRX1Q86UT6 975 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 TRIM50Q86XT4 487 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 CCDC155Q8N6L0 562 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 WNT8BQ93098 351 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 PGBD1Q96JS3 809 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 C16orf70Q9BSU1 422 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 TUT1Q9H6E5 874 aaKnown RBP13.32□□□□□ -0.28
LINC00963-201ENST00000412141 SLC28A3Q9HAS3 691 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 683.5 ms