RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 RSBN1LQ6PCB5 846 aaPredicted RBP5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 FAM186BQ8IYM0 893 aa5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 STAG2Q8N3U4 1231 aa5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 GUF1Q8N442 669 aaKnown RBP5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 LPAR1Q92633 364 aa5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 PPP1R13BQ96KQ4 1090 aa5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 RHOXF2Q9BQY4 288 aa5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 ZMYND12Q9H0C1 365 aa5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 EHD4Q9H223 541 aa5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 RNF216Q9NWF9 866 aaPredicted RBP5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 HOXC10Q9NYD6 342 aa5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 ATF5Q9Y2D1 282 aaPredicted RBP5.21□□□□□ -1.58
PCDH11X-207ENST00000406881 ZNF142P52746 1687 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 LGALS16A8MUM7 142 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 ACTN4O43707 911 aaKnown RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 PSAPP07602 524 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 LMNB1P20700 586 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 CDC25AP30304 524 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 PRELPP51888 382 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 EN1Q05925 392 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 RBL2Q08999 1139 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 CALCOCO2Q13137 446 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 TFDP1Q14186 410 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 KRT31Q15323 416 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 FAM83BQ5T0W9 1011 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 SMIM5Q71RC9 77 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 PEX26Q7Z412 305 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 SMYD4Q8IYR2 804 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 AGBL3Q8NEM8 1001 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 PAGR1Q9BTK6 254 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 EDEM3Q9BZQ6 932 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 CTTNBP2NLQ9P2B4 639 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 TMEM110-MUSTN1A8MSY1 372 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 STXBP3O00186 592 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 PLSCR1O15162 318 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 PDHBP11177 359 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 HARSP12081 509 aaKnown RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 KCNJ6P48051 423 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 POLGP54098 1239 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 POLR2FP61218 127 aaKnown RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 FKBP1AP62942 108 aaKnown RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 KRT76Q01546 638 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 CUL4BQ13620 913 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 NCAPG2Q86XI2 1143 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 MB21D1Q8N884 522 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 ENGASEQ8NFI3 743 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 LRRC45Q96CN5 670 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 ZDHHC15Q96MV8 337 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 UIMC1Q96RL1 719 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 NDST4Q9H3R1 872 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 RNF14Q9UBS8 474 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 FEZ2Q9UHY8 353 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 CDC23Q9UJX2 597 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 AMFRQ9UKV5 643 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 PALM3A6NDB9 673 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 MFAP3LO75121 409 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 SRGNP10124 158 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 EZRP15311 586 aaKnown RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 TNNI1P19237 187 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 TMOD1P28289 359 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 SFNP31947 248 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 SLC8A3P57103 927 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 PAK2Q13177 524 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 IQCB1Q15051 598 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 RNF207Q6ZRF8 634 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 MIGA2Q7L4E1 593 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 HACE1Q8IYU2 909 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 GIMAP8Q8ND71 665 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 SLC7A3Q8WY07 619 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 ANKS1AQ92625 1134 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 GJA10Q969M2 543 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 DESI2Q9BSY9 194 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 RTFDC1Q9BY42 306 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 CCDC113Q9H0I3 377 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 VPS33BQ9H267 617 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 ZNF408Q9H9D4 720 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 ZNF277Q9NRM2 450 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 C1orf112Q9NSG2 853 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 BCCIPQ9P287 314 aaKnown RBP eCLIP5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 LTN1O94822 1766 aa5.2□□□□□ -1.58
PCDH11X-207ENST00000406881 A0A1W2PQC6 194 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 WDR46O15213 610 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 ATP1A3P13637 1013 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 CHRNA5P30532 468 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 MYL7Q01449 175 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 GPR162Q16538 588 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 METTL16Q86W50 562 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 COL23A1Q86Y22 540 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 U2AF1L4Q8WU68 220 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 RABGGTAQ92696 567 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 MIS12Q9H081 205 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 SPTLC3Q9NUV7 552 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 ZNF70Q9UC06 446 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 PNMA3Q9UL41 463 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 GDAQ9Y2T3 454 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 RIC1Q4ADV7 1423 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 A0A0G2JLW4 131 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 WDR64B1ANS9 1081 aa5.19□□□□□ -1.58
PCDH11X-207ENST00000406881 USP17L15C9J2P7 530 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms