RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 RPUSD2Q8IZ73 545 aaKnown RBP13.97□□□□□ -0.17
GAPDH-202ENST00000396856 ZNF654Q8IZM8 581 aa13.97□□□□□ -0.17
GAPDH-202ENST00000396856 AFG1LQ8WV93 481 aa13.97□□□□□ -0.17
GAPDH-202ENST00000396856 EMID1Q96A84 441 aaPredicted RBP13.97□□□□□ -0.17
GAPDH-202ENST00000396856 PDCD2LQ9BRP1 358 aa13.97□□□□□ -0.17
GAPDH-202ENST00000396856 SPZ1Q9BXG8 430 aa13.97□□□□□ -0.17
GAPDH-202ENST00000396856 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
GAPDH-202ENST00000396856 DDX41Q9UJV9 622 aaKnown RBP13.97□□□□□ -0.17
GAPDH-202ENST00000396856 MRVI1Q9Y6F6 885 aa13.97□□□□□ -0.17
GAPDH-202ENST00000396856 USP34Q70CQ2 3546 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 CCDC69A6NI79 296 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 PFKMP08237 780 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 MMP3P08254 477 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 CALM1P0DP23 149 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 CALM2P0DP24 149 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 CALM3P0DP25 149 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 CASTP20810 708 aaKnown RBP13.96□□□□□ -0.17
GAPDH-202ENST00000396856 MRE11P49959 708 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 ARHGAP1Q07960 439 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 LAMC2Q13753 1193 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 NECTIN1Q15223 517 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 DGKDQ16760 1214 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 FAM47CQ5HY64 1035 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 RNF20Q5VTR2 975 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 PPP2R2DQ66LE6 453 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 CREB3L3Q68CJ9 461 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 NFXL1Q6ZNB6 911 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 VSIG10LQ86VR7 867 aa13.96□□□□□ -0.17
GAPDH-202ENST00000396856 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.17
GAPDH-202ENST00000396856 TRMT13Q9NUP7 481 aaKnown RBP13.96□□□□□ -0.17
GAPDH-202ENST00000396856 MYH6P13533 1939 aa13.96□□□□□ -0.18
GAPDH-202ENST00000396856 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 SH2B2O14492 632 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-202ENST00000396856 TGFB3P10600 412 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 MYCLP12524 364 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-202ENST00000396856 CCND2P30279 289 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 HOXA13P31271 388 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-202ENST00000396856 LIFRP42702 1097 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 CCL23P55773 120 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 PGM5Q15124 567 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 SESTD1Q86VW0 696 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 DHX37Q8IY37 1157 aaKnown RBP13.95□□□□□ -0.18
GAPDH-202ENST00000396856 PPTC7Q8NI37 304 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 KATNAL1Q9BW62 490 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 WNT8AQ9H1J5 351 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 SEC63Q9UGP8 760 aaKnown RBP13.95□□□□□ -0.18
GAPDH-202ENST00000396856 NOD1Q9Y239 953 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 GTF3C3Q9Y5Q9 886 aa13.95□□□□□ -0.18
GAPDH-202ENST00000396856 PRR33A8MZF0 331 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 STAM2O75886 525 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 CYP2C9P11712 490 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 RFC2P35250 354 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 BFSP2Q13515 415 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 FCHSD1Q86WN1 690 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 CCDC155Q8N6L0 562 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 CUL5Q93034 780 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 MYL10Q9BUA6 226 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 SLC4A7Q9Y6M7 1214 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 SCN10AQ9Y5Y9 1956 aa13.94□□□□□ -0.18
GAPDH-202ENST00000396856 FRMPD4Q14CM0 1322 aa13.93□□□□□ -0.18
GAPDH-202ENST00000396856 LPXNO60711 386 aa13.93□□□□□ -0.18
GAPDH-202ENST00000396856 RGS20O76081 388 aa13.93□□□□□ -0.18
GAPDH-202ENST00000396856 ARHGEF15O94989 841 aa13.93□□□□□ -0.18
GAPDH-202ENST00000396856 SKIV2LQ15477 1246 aaKnown RBP13.93□□□□□ -0.18
GAPDH-202ENST00000396856 GNPTABQ3T906 1256 aa13.93□□□□□ -0.18
GAPDH-202ENST00000396856 RETREG2Q8NC44 543 aa13.93□□□□□ -0.18
GAPDH-202ENST00000396856 HLA-CQ95604 372 aa13.93□□□□□ -0.18
GAPDH-202ENST00000396856 SLC12A7Q9Y666 1083 aa13.93□□□□□ -0.18
GAPDH-202ENST00000396856 KIAA1217Q5T5P2 1943 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 PPFIA4O75335 1185 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 F2P00734 622 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 CA3P07451 260 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 ACTN1P12814 892 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 HOXD8P13378 290 aaPredicted RBP13.92□□□□□ -0.18
GAPDH-202ENST00000396856 CHMP4BP1P59074 171 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 NHLH1Q02575 133 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 PTGISQ16647 500 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 CELF3Q5SZQ8 465 aaKnown RBP13.92□□□□□ -0.18
GAPDH-202ENST00000396856 MYSM1Q5VVJ2 828 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 SYNE3Q6ZMZ3 975 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 SGMS1Q86VZ5 419 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 IL31RAQ8NI17 732 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 SMARCC2Q8TAQ2 1214 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 CAGE1Q8TC20 777 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 PIBF1Q8WXW3 757 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 KAT2BQ92831 832 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 SCLYQ96I15 445 aa13.92□□□□□ -0.18
GAPDH-202ENST00000396856 PIK3CDO00329 1044 aa13.91□□□□□ -0.18
GAPDH-202ENST00000396856 CDC45O75419 566 aa13.91□□□□□ -0.18
GAPDH-202ENST00000396856 GGPS1O95749 300 aa13.91□□□□□ -0.18
GAPDH-202ENST00000396856 ATP2A2P16615 1042 aaKnown RBP13.91□□□□□ -0.18
GAPDH-202ENST00000396856 KRT32Q14532 448 aa13.91□□□□□ -0.18
GAPDH-202ENST00000396856 XRRA1Q6P2D8 792 aa13.91□□□□□ -0.18
GAPDH-202ENST00000396856 SRBD1Q8N5C6 995 aaKnown RBP13.91□□□□□ -0.18
GAPDH-202ENST00000396856 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
GAPDH-202ENST00000396856 FANCBQ8NB91 859 aa13.91□□□□□ -0.18
GAPDH-202ENST00000396856 SPATA33Q96N06 139 aa13.91□□□□□ -0.18
GAPDH-202ENST00000396856 INPP4AQ96PE3 977 aaPredicted RBP13.91□□□□□ -0.18
GAPDH-202ENST00000396856 NEK1Q96PY6 1258 aa13.91□□□□□ -0.18
GAPDH-202ENST00000396856 CERS4Q9HA82 394 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms