RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RAPGEFL1Q9UHV5 662 aa20.37■□□□□ 0.85
EXOSC3-202ENST00000396521 TET1Q8NFU7 2136 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 LINC01553A4QN01 128 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 CAND2O75155 1236 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 AMHP03971 560 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 TRIM71Q2Q1W2 868 aaKnown RBP20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 PUS10Q3MIT2 529 aaKnown RBP20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 CELF3Q5SZQ8 465 aaKnown RBP20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 ZNF618Q5T7W0 954 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 VSIG10LQ86VR7 867 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 SPATA33Q96N06 139 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 PDCD2LQ9BRP1 358 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 EPHX3Q9H6B9 360 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 VAT1LQ9HCJ6 419 aa20.36■□□□□ 0.85
EXOSC3-202ENST00000396521 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.35■□□□□ 0.85
EXOSC3-202ENST00000396521 B4E1Z4 1266 aa20.35■□□□□ 0.85
EXOSC3-202ENST00000396521 PTPROQ16827 1216 aa20.35■□□□□ 0.85
EXOSC3-202ENST00000396521 IFIT1BQ5T764 474 aaKnown RBP20.35■□□□□ 0.85
EXOSC3-202ENST00000396521 SERINC5Q86VE9 423 aa20.35■□□□□ 0.85
EXOSC3-202ENST00000396521 SMC5Q8IY18 1101 aa20.35■□□□□ 0.85
EXOSC3-202ENST00000396521 LNPKQ9C0E8 428 aa20.35■□□□□ 0.85
EXOSC3-202ENST00000396521 RWDD1Q9H446 243 aaPredicted RBP20.35■□□□□ 0.85
EXOSC3-202ENST00000396521 UBE2ZQ9H832 354 aaPredicted RBP20.35■□□□□ 0.85
EXOSC3-202ENST00000396521 TCF20Q9UGU0 1960 aaKnown RBP20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 RSPH10B2B2RC85 870 aa20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 ZBTB5O15062 677 aa20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 RSPH10BP0C881 870 aa20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 ZNF286BP0CG31 522 aa20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 LEXMQ3ZCV2 418 aa20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 TRAF7Q6Q0C0 670 aa20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 CWC27Q6UX04 472 aaKnown RBP20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 GDPD5Q8WTR4 605 aa20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 MTMR8Q96EF0 704 aa20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 PCDHA1Q9Y5I3 950 aa20.34■□□□□ 0.85
EXOSC3-202ENST00000396521 KLRF2D3W0D1 207 aa20.33■□□□□ 0.85
EXOSC3-202ENST00000396521 PI4K2BG5E9Z4 385 aa20.33■□□□□ 0.85
EXOSC3-202ENST00000396521 STAM2O75886 525 aa20.33■□□□□ 0.85
EXOSC3-202ENST00000396521 GNAT1P11488 350 aa20.33■□□□□ 0.85
EXOSC3-202ENST00000396521 HTRA4P83105 476 aaPredicted RBP20.33■□□□□ 0.85
EXOSC3-202ENST00000396521 FBXO22Q8NEZ5 403 aa20.33■□□□□ 0.85
EXOSC3-202ENST00000396521 MLXIPQ9HAP2 919 aa20.33■□□□□ 0.85
EXOSC3-202ENST00000396521 GCOM1H8Y6P7 765 aaPredicted RBP20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 GGPS1O95749 300 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 POLR2MP0CAP2 368 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 MYCLP12524 364 aaPredicted RBP20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 CCND2P30279 289 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 HOXD11P31277 338 aaPredicted RBP20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 THPOP40225 353 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 HSDL1Q3SXM5 330 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 GNPTABQ3T906 1256 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 PLEKHG4Q58EX7 1191 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 SPRED2Q7Z698 418 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 TMCO2Q7Z6W1 182 aaPredicted RBP20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 CHD1LQ86WJ1 897 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 DBF4BQ8NFT6 615 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 SP7Q8TDD2 431 aaPredicted RBP20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 MRPL38Q96DV4 380 aaKnown RBP20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 USP26Q9BXU7 913 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 MTUS1Q9ULD2 1270 aa20.32■□□□□ 0.84
EXOSC3-202ENST00000396521 C17orf102A2RUQ5 167 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 H3BRB1 525 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 OPLAHO14841 1288 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 RGS20O76081 388 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 MBTPS1Q14703 1052 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 PGM5Q15124 567 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 PLEKHM2Q8IWE5 1019 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 SEPT8Q92599 483 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 ATP6V0A1Q93050 837 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 C16orf70Q9BSU1 422 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 TUT1Q9H6E5 874 aaKnown RBP20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 FAM50BQ9Y247 325 aa20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 TRIP12Q14669 1992 aaPredicted RBP20.31■□□□□ 0.84
EXOSC3-202ENST00000396521 BRWD1Q9NSI6 2320 aa20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 PALM3A6NDB9 673 aaPredicted RBP20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 HOXC8P31273 242 aa20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 TRDNQ13061 729 aa20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 MKRN4PQ13434 485 aaPredicted RBP20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 TIGD5Q53EQ6 642 aa20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 FAM178BQ8IXR5 827 aa20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 MYOCDQ8IZQ8 938 aa20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 GJD3Q8N144 294 aa20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 APBB2Q92870 758 aa20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 PIEZO1Q92508 2521 aa20.3■□□□□ 0.84
EXOSC3-202ENST00000396521 NOP56O00567 594 aaKnown RBP20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 NCK2O43639 380 aa20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 ALADP13716 330 aa20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 UBA1P22314 1058 aaKnown RBP20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 ZNF200P98182 395 aaPredicted RBP20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 NEDD9Q14511 834 aa20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 FAM117BQ6P1L5 589 aa20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 STAG2Q8N3U4 1231 aa20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 WNT8BQ93098 351 aa20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 TOP1MTQ969P6 601 aa20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 MAD2L2Q9UI95 211 aa20.29■□□□□ 0.84
EXOSC3-202ENST00000396521 KCNA5P22460 613 aa20.28■□□□□ 0.84
EXOSC3-202ENST00000396521 ICAM3P32942 547 aa20.28■□□□□ 0.84
EXOSC3-202ENST00000396521 NUCB1Q02818 461 aa20.28■□□□□ 0.84
EXOSC3-202ENST00000396521 SEC23AQ15436 765 aa20.28■□□□□ 0.84
EXOSC3-202ENST00000396521 TCTN1Q2MV58 587 aa20.28■□□□□ 0.84
EXOSC3-202ENST00000396521 METTL7BQ6UX53 244 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms