RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 RNF20Q5VTR2 975 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 RPUSD2Q8IZ73 545 aaKnown RBP21.12■□□□□ 0.97
FXN-203ENST00000396366 SMARCC2Q8TAQ2 1214 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 SPATA33Q96N06 139 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 ZNF576Q9H609 170 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 HDAC6Q9UBN7 1215 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 BRPF3Q9ULD4 1205 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 NOD1Q9Y239 953 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 UNC80Q8N2C7 3258 aa21.12■□□□□ 0.97
FXN-203ENST00000396366 GBF1Q92538 1859 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 FRMPD4Q14CM0 1322 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 MFSD10Q14728 455 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 KCNV1Q6PIU1 500 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 TMTC3Q6ZXV5 915 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 SESTD1Q86VW0 696 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 SGMS1Q86VZ5 419 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 MICU3Q86XE3 530 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 TELO2Q9Y4R8 837 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 DOCK5Q9H7D0 1870 aa21.11■□□□□ 0.97
FXN-203ENST00000396366 HAS3O00219 553 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 TGFB3P10600 412 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 CPA1P15085 419 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 RABGGTBP53611 331 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 ZNF200P98182 395 aaPredicted RBP21.1■□□□□ 0.97
FXN-203ENST00000396366 SEMA3FQ13275 785 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 HIC1Q14526 733 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 KIAA0753Q2KHM9 967 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 DHX32Q7L7V1 743 aaKnown RBP21.1■□□□□ 0.97
FXN-203ENST00000396366 C7orf31Q8N865 590 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 RETREG2Q8NC44 543 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 DHX38Q92620 1227 aaKnown RBP21.1■□□□□ 0.97
FXN-203ENST00000396366 MLXIPQ9HAP2 919 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 GTF2IRD1Q9UHL9 959 aa21.1■□□□□ 0.97
FXN-203ENST00000396366 TMEM265A0A087WTH1 108 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 ZBBXA8MT70 800 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 SPATA31C2B4DYI2 1134 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 PIK3CDO00329 1044 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 PITPNM1O00562 1244 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 PPFIA4O75335 1185 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 F2P00734 622 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 HOXD8P13378 290 aaPredicted RBP21.09■□□□□ 0.97
FXN-203ENST00000396366 TSGA10IPQ3SY00 556 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 APOA5Q6Q788 366 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 CUL5Q93034 780 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 INPP4AQ96PE3 977 aaPredicted RBP21.09■□□□□ 0.97
FXN-203ENST00000396366 YBX2Q9Y2T7 364 aaKnown RBP21.09■□□□□ 0.97
FXN-203ENST00000396366 SLC4A7Q9Y6M7 1214 aa21.09■□□□□ 0.97
FXN-203ENST00000396366 TET1Q8NFU7 2136 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 MYOGP15173 224 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 ICAM3P32942 547 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 BFSP2Q13515 415 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 GPNMBQ14956 572 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 UBE2SQ16763 222 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 PRUNE2Q8WUY3 3088 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 C16orf70Q9BSU1 422 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 MTIF3Q9H2K0 278 aaKnown RBP21.08■□□□□ 0.97
FXN-203ENST00000396366 NKX2-4Q9H2Z4 354 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 PSTPIP2Q9H939 334 aa21.08■□□□□ 0.97
FXN-203ENST00000396366 TANC1Q9C0D5 1861 aa21.07■□□□□ 0.96
FXN-203ENST00000396366 FOSL2P15408 326 aa21.07■□□□□ 0.96
FXN-203ENST00000396366 PCNX4Q63HM2 1172 aa21.07■□□□□ 0.96
FXN-203ENST00000396366 SYNE3Q6ZMZ3 975 aa21.07■□□□□ 0.96
FXN-203ENST00000396366 CYFIP1Q7L576 1253 aa21.07■□□□□ 0.96
FXN-203ENST00000396366 HEATR3Q7Z4Q2 680 aa21.07■□□□□ 0.96
FXN-203ENST00000396366 MAFAQ8NHW3 353 aaPredicted RBP21.07■□□□□ 0.96
FXN-203ENST00000396366 WNT8BQ93098 351 aa21.07■□□□□ 0.96
FXN-203ENST00000396366 KATNAL1Q9BW62 490 aa21.07■□□□□ 0.96
FXN-203ENST00000396366 MSRAQ9UJ68 235 aa21.07■□□□□ 0.96
FXN-203ENST00000396366 GNPTABQ3T906 1256 aa21.06■□□□□ 0.96
FXN-203ENST00000396366 FTOQ9C0B1 505 aaKnown RBP eCLIP21.06■□□□□ 0.96
FXN-203ENST00000396366 ZBTB43O43298 467 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 FIBPO43427 364 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 STAM2O75886 525 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 PFKMP08237 780 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 RFC2P35250 354 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 FUT2Q10981 343 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 WWC2Q6AWC2 1192 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 TYW1BQ6NUM6 668 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 PRDM12Q9H4Q4 367 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 FAM217BQ9NTX9 383 aaPredicted RBP21.05■□□□□ 0.96
FXN-203ENST00000396366 CHD7Q9P2D1 2997 aa21.05■□□□□ 0.96
FXN-203ENST00000396366 CNTNAP5Q8WYK1 1306 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 KLF18A0A0U1RQI7 1052 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 DLL1O00548 723 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 ATP9AO75110 1047 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 LGALS2P05162 132 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 CKBP12277 381 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 SELPP16109 830 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 ATP2A2P16615 1042 aaKnown RBP21.04■□□□□ 0.96
FXN-203ENST00000396366 CDC27P30260 824 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 SP4Q02446 784 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 NEDD9Q14511 834 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 RAB30Q15771 203 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 RTN1Q16799 776 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 TRIM71Q2Q1W2 868 aaKnown RBP21.04■□□□□ 0.96
FXN-203ENST00000396366 METTL7BQ6UX53 244 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 CAGE1Q8TC20 777 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 AFAP1L1Q8TED9 768 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 KCNB2Q92953 911 aa21.04■□□□□ 0.96
FXN-203ENST00000396366 GPR20Q99678 358 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms