RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TTC28Q96AY4 2481 aa21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 ZBBXA8MT70 800 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 DDAH1O94760 285 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 PLEKHA8P1O95397 391 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 CCND2P30279 289 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 RFC2P35250 354 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 TRAF1Q13077 416 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 BFSP2Q13515 415 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 CREB3L3Q68CJ9 461 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 CMTR1Q8N1G2 835 aaKnown RBP21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 SRBD1Q8N5C6 995 aaKnown RBP21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 RETREG2Q8NC44 543 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 MTA3Q9BTC8 594 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 NOD1Q9Y239 953 aa21.11■□□□□ 0.97
PDLIM7-205ENST00000393551 GGPS1O95749 300 aa21.1■□□□□ 0.97
PDLIM7-205ENST00000393551 ATP2A2P16615 1042 aaKnown RBP21.1■□□□□ 0.97
PDLIM7-205ENST00000393551 RXRAP19793 462 aa21.1■□□□□ 0.97
PDLIM7-205ENST00000393551 MCM5P33992 734 aa21.1■□□□□ 0.97
PDLIM7-205ENST00000393551 MFSD10Q14728 455 aa21.1■□□□□ 0.97
PDLIM7-205ENST00000393551 KIAA0753Q2KHM9 967 aa21.1■□□□□ 0.97
PDLIM7-205ENST00000393551 KCNV1Q6PIU1 500 aa21.1■□□□□ 0.97
PDLIM7-205ENST00000393551 WNT8BQ93098 351 aa21.1■□□□□ 0.97
PDLIM7-205ENST00000393551 ALG1Q9BT22 464 aa21.1■□□□□ 0.97
PDLIM7-205ENST00000393551 MEIS2O14770 477 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 PPFIA4O75335 1185 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 TGFB3P10600 412 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 SMARCA1P28370 1054 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 ZNF200P98182 395 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 RBL2Q08999 1139 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 SEMA3FQ13275 785 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 USP17L6PQ6QN14 398 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 CASC1Q6TDU7 716 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 C7orf31Q8N865 590 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 CTCFLQ8NI51 663 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 CAGE1Q8TC20 777 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 TMEM87BQ96K49 555 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 SPATA33Q96N06 139 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 C16orf70Q9BSU1 422 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 LRRC2Q9BYS8 371 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 SLC28A3Q9HAS3 691 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 TELO2Q9Y4R8 837 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 PCDHA11Q9Y5I1 949 aa21.09■□□□□ 0.97
PDLIM7-205ENST00000393551 LIFRP42702 1097 aa21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 TCTN1Q2MV58 587 aa21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 TRIM71Q2Q1W2 868 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 BMP2KLQ5H9B9 411 aa21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 TRAF7Q6Q0C0 670 aa21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 RAB11FIP4Q86YS3 637 aa21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 AFAP1L1Q8TED9 768 aa21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 RRP36Q96EU6 259 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 INPP4AQ96PE3 977 aaPredicted RBP21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 ANO2Q9NQ90 1003 aa21.08■□□□□ 0.97
PDLIM7-205ENST00000393551 CKBP12277 381 aa21.07■□□□□ 0.96
PDLIM7-205ENST00000393551 SELPP16109 830 aa21.07■□□□□ 0.96
PDLIM7-205ENST00000393551 ICAM3P32942 547 aa21.07■□□□□ 0.96
PDLIM7-205ENST00000393551 KIF5BP33176 963 aa21.07■□□□□ 0.96
PDLIM7-205ENST00000393551 GAS2L1Q99501 681 aaPredicted RBP21.07■□□□□ 0.96
PDLIM7-205ENST00000393551 KATNAL1Q9BW62 490 aa21.07■□□□□ 0.96
PDLIM7-205ENST00000393551 FTOQ9C0B1 505 aaKnown RBP eCLIP21.07■□□□□ 0.96
PDLIM7-205ENST00000393551 PRDM6Q9NQX0 595 aa21.07■□□□□ 0.96
PDLIM7-205ENST00000393551 RTEL1Q9NZ71 1219 aa21.07■□□□□ 0.96
PDLIM7-205ENST00000393551 SPATA31C2B4DYI2 1134 aa21.06■□□□□ 0.96
PDLIM7-205ENST00000393551 PIK3CDO00329 1044 aa21.06■□□□□ 0.96
PDLIM7-205ENST00000393551 NBNO60934 754 aa21.06■□□□□ 0.96
PDLIM7-205ENST00000393551 ARHGEF15O94989 841 aa21.06■□□□□ 0.96
PDLIM7-205ENST00000393551 ACTN1P12814 892 aa21.06■□□□□ 0.96
PDLIM7-205ENST00000393551 NFXL1Q6ZNB6 911 aa21.06■□□□□ 0.96
PDLIM7-205ENST00000393551 LRRC8DQ7L1W4 858 aa21.06■□□□□ 0.96
PDLIM7-205ENST00000393551 TMTC2Q8N394 836 aa21.06■□□□□ 0.96
PDLIM7-205ENST00000393551 LZTS2Q9BRK4 669 aa21.06■□□□□ 0.96
PDLIM7-205ENST00000393551 hCG_1642624A0A1W2PR95 340 aa21.05■□□□□ 0.96
PDLIM7-205ENST00000393551 CCDC69A6NI79 296 aa21.05■□□□□ 0.96
PDLIM7-205ENST00000393551 CXCL10P02778 98 aa21.05■□□□□ 0.96
PDLIM7-205ENST00000393551 PTK7Q13308 1070 aa21.05■□□□□ 0.96
PDLIM7-205ENST00000393551 MBTPS1Q14703 1052 aa21.05■□□□□ 0.96
PDLIM7-205ENST00000393551 PPP2R2DQ66LE6 453 aa21.05■□□□□ 0.96
PDLIM7-205ENST00000393551 CCDC155Q8N6L0 562 aa21.05■□□□□ 0.96
PDLIM7-205ENST00000393551 MLXIPQ9HAP2 919 aa21.05■□□□□ 0.96
PDLIM7-205ENST00000393551 PRRC2BQ5JSZ5 2229 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 STAM2O75886 525 aa21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 CA3P07451 260 aa21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 HOXC8P31273 242 aa21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 PCNX4Q63HM2 1172 aa21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 CENPQQ7L2Z9 268 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 SGMS1Q86VZ5 419 aa21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 SMARCC2Q8TAQ2 1214 aa21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 PHOSPHO2Q8TCD6 241 aa21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 PPM1EQ8WY54 764 aa21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 SLC9A7Q96T83 725 aa21.04■□□□□ 0.96
PDLIM7-205ENST00000393551 LGALS2P05162 132 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 GNAQP50148 359 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 GNPTABQ3T906 1256 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 ZNF618Q5T7W0 954 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 METTL7BQ6UX53 244 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 TMTC3Q6ZXV5 915 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 CYFIP1Q7L576 1253 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 TMCO2Q7Z6W1 182 aaPredicted RBP21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 HERC6Q8IVU3 1022 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 RASEFQ8IZ41 740 aa21.03■□□□□ 0.96
PDLIM7-205ENST00000393551 CCDC82Q8N4S0 544 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms