RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 SPATA31C2B4DYI2 1134 aa21.34■■□□□ 1.01
SMN2-202ENST00000380742 ARIH2O95376 493 aa21.34■■□□□ 1.01
SMN2-202ENST00000380742 GCFC2P16383 781 aaKnown RBP21.34■■□□□ 1.01
SMN2-202ENST00000380742 ICAM3P32942 547 aa21.34■■□□□ 1.01
SMN2-202ENST00000380742 ADCYAP1R1P41586 468 aa21.34■■□□□ 1.01
SMN2-202ENST00000380742 MTMR1Q13613 665 aa21.34■■□□□ 1.01
SMN2-202ENST00000380742 ZNF174Q15697 407 aa21.34■■□□□ 1.01
SMN2-202ENST00000380742 CCDC144BQ3MJ40 725 aa21.34■■□□□ 1.01
SMN2-202ENST00000380742 GNPTABQ3T906 1256 aa21.34■■□□□ 1.01
SMN2-202ENST00000380742 NAP1L4Q99733 375 aaKnown RBP21.34■■□□□ 1.01
SMN2-202ENST00000380742 KCNH7Q9NS40 1196 aa21.34■■□□□ 1.01
SMN2-202ENST00000380742 DDX25Q9UHL0 483 aaKnown RBP21.34■■□□□ 1.01
SMN2-202ENST00000380742 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.33■■□□□ 1
SMN2-202ENST00000380742 ADCY6O43306 1168 aa21.33■■□□□ 1
SMN2-202ENST00000380742 FIBPO43427 364 aa21.33■■□□□ 1
SMN2-202ENST00000380742 CCND3P30281 292 aaPredicted RBP21.33■■□□□ 1
SMN2-202ENST00000380742 MCM7P33993 719 aa21.33■■□□□ 1
SMN2-202ENST00000380742 FOXD4L6Q3SYB3 417 aaPredicted RBP21.33■■□□□ 1
SMN2-202ENST00000380742 CCDC62Q6P9F0 684 aa21.33■■□□□ 1
SMN2-202ENST00000380742 FOXD4L3Q6VB84 417 aaPredicted RBP21.33■■□□□ 1
SMN2-202ENST00000380742 SCFD2Q8WU76 684 aa21.33■■□□□ 1
SMN2-202ENST00000380742 UIMC1Q96RL1 719 aa21.33■■□□□ 1
SMN2-202ENST00000380742 CHMP5Q9NZZ3 219 aa21.33■■□□□ 1
SMN2-202ENST00000380742 MRVI1Q9Y6F6 885 aa21.33■■□□□ 1
SMN2-202ENST00000380742 ATP9AO75110 1047 aa21.32■■□□□ 1
SMN2-202ENST00000380742 SETQ01105 290 aaPredicted RBP21.32■■□□□ 1
SMN2-202ENST00000380742 SP2Q02086 613 aa21.32■■□□□ 1
SMN2-202ENST00000380742 AGO4Q9HCK5 861 aaKnown RBP21.32■■□□□ 1
SMN2-202ENST00000380742 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.32■■□□□ 1
SMN2-202ENST00000380742 DDX41Q9UJV9 622 aaKnown RBP21.32■■□□□ 1
SMN2-202ENST00000380742 MSH4O15457 936 aa21.31■■□□□ 1
SMN2-202ENST00000380742 MAFGO15525 162 aa21.31■■□□□ 1
SMN2-202ENST00000380742 TXNP10599 105 aaKnown RBP21.31■■□□□ 1
SMN2-202ENST00000380742 TTLL4Q14679 1199 aa21.31■■□□□ 1
SMN2-202ENST00000380742 LY6KQ17RY6 165 aa21.31■■□□□ 1
SMN2-202ENST00000380742 IQSEC1Q6DN90 963 aa21.31■■□□□ 1
SMN2-202ENST00000380742 CDHR1Q96JP9 859 aa21.31■■□□□ 1
SMN2-202ENST00000380742 FTOQ9C0B1 505 aaKnown RBP eCLIP21.31■■□□□ 1
SMN2-202ENST00000380742 MCOLN1Q9GZU1 580 aa21.31■■□□□ 1
SMN2-202ENST00000380742 TMEM60Q9H2L4 133 aa21.31■■□□□ 1
SMN2-202ENST00000380742 BCAS3Q9H6U6 928 aa21.31■■□□□ 1
SMN2-202ENST00000380742 PKD2L1Q9P0L9 805 aa21.31■■□□□ 1
SMN2-202ENST00000380742 SEPT4O43236 478 aa21.3■■□□□ 1
SMN2-202ENST00000380742 NEMFO60524 1076 aa21.3■■□□□ 1
SMN2-202ENST00000380742 TGFB3P10600 412 aa21.3■■□□□ 1
SMN2-202ENST00000380742 SMPD1P17405 629 aa21.3■■□□□ 1
SMN2-202ENST00000380742 PTGS1P23219 599 aa21.3■■□□□ 1
SMN2-202ENST00000380742 CNGA1P29973 690 aa21.3■■□□□ 1
SMN2-202ENST00000380742 ORC2Q13416 577 aaPredicted RBP21.3■■□□□ 1
SMN2-202ENST00000380742 GJC2Q5T442 439 aaPredicted RBP21.3■■□□□ 1
SMN2-202ENST00000380742 KCNV1Q6PIU1 500 aa21.3■■□□□ 1
SMN2-202ENST00000380742 C4orf32Q8N8J7 132 aa21.3■■□□□ 1
SMN2-202ENST00000380742 ETNPPLQ8TBG4 499 aa21.3■■□□□ 1
SMN2-202ENST00000380742 COPS5Q92905 334 aa21.3■■□□□ 1
SMN2-202ENST00000380742 GJA10Q969M2 543 aa21.3■■□□□ 1
SMN2-202ENST00000380742 CHAMP1Q96JM3 812 aa21.3■■□□□ 1
SMN2-202ENST00000380742 USP28Q96RU2 1077 aa21.3■■□□□ 1
SMN2-202ENST00000380742 KCNMB3Q9NPA1 279 aa21.3■■□□□ 1
SMN2-202ENST00000380742 FAM184BQ9ULE4 1060 aa21.3■■□□□ 1
SMN2-202ENST00000380742 CLIC4Q9Y696 253 aa21.3■■□□□ 1
SMN2-202ENST00000380742 WDR81Q562E7 1941 aa21.3■■□□□ 1
SMN2-202ENST00000380742 AKR1A1P14550 325 aa21.29■■□□□ 1
SMN2-202ENST00000380742 KCNA2P16389 499 aa21.29■■□□□ 1
SMN2-202ENST00000380742 UBA1P22314 1058 aaKnown RBP21.29■■□□□ 1
SMN2-202ENST00000380742 TNFAIP2Q03169 654 aa21.29■■□□□ 1
SMN2-202ENST00000380742 ITGB3BPQ13352 177 aaPredicted RBP21.29■■□□□ 1
SMN2-202ENST00000380742 MTFR1Q15390 333 aa21.29■■□□□ 1
SMN2-202ENST00000380742 SF3A1Q15459 793 aaKnown RBP21.29■■□□□ 1
SMN2-202ENST00000380742 DUSP28Q4G0W2 176 aa21.29■■□□□ 1
SMN2-202ENST00000380742 HAS1Q92839 578 aa21.29■■□□□ 1
SMN2-202ENST00000380742 LENG1Q96BZ8 264 aaPredicted RBP21.29■■□□□ 1
SMN2-202ENST00000380742 ARMC5Q96C12 935 aa21.29■■□□□ 1
SMN2-202ENST00000380742 ZNF577Q9BSK1 485 aa21.29■■□□□ 1
SMN2-202ENST00000380742 HMX1Q9NP08 348 aaPredicted RBP21.29■■□□□ 1
SMN2-202ENST00000380742 TFIP11Q9UBB9 837 aaKnown RBP21.29■■□□□ 1
SMN2-202ENST00000380742 IPO5O00410 1097 aaKnown RBP21.28■■□□□ 1
SMN2-202ENST00000380742 DNM1Q05193 864 aaKnown RBP21.28■■□□□ 1
SMN2-202ENST00000380742 PTGDRQ13258 359 aa21.28■■□□□ 1
SMN2-202ENST00000380742 ANO1Q5XXA6 986 aa21.28■■□□□ 1
SMN2-202ENST00000380742 SLC5A5Q92911 643 aa21.28■■□□□ 1
SMN2-202ENST00000380742 ZNF333Q96JL9 665 aa21.28■■□□□ 1
SMN2-202ENST00000380742 MTMR9Q96QG7 549 aa21.28■■□□□ 1
SMN2-202ENST00000380742 SENP7Q9BQF6 1050 aa21.28■■□□□ 1
SMN2-202ENST00000380742 UNC93B1Q9H1C4 597 aa21.28■■□□□ 1
SMN2-202ENST00000380742 GNEQ9Y223 722 aaKnown RBP21.28■■□□□ 1
SMN2-202ENST00000380742 TBX3O15119 743 aa21.27■■□□□ 1
SMN2-202ENST00000380742 DHX15O43143 795 aaKnown RBP21.27■■□□□ 1
SMN2-202ENST00000380742 SORBS3O60504 671 aa21.27■■□□□ 1
SMN2-202ENST00000380742 MYCP01106 439 aaPredicted RBP21.27■■□□□ 1
SMN2-202ENST00000380742 CEBPZQ03701 1054 aaKnown RBP21.27■■□□□ 1
SMN2-202ENST00000380742 CALCRLQ16602 461 aa21.27■■□□□ 1
SMN2-202ENST00000380742 ZNF396Q96N95 335 aaPredicted RBP21.27■■□□□ 1
SMN2-202ENST00000380742 POTEFA5A3E0 1075 aa21.26■□□□□ 0.99
SMN2-202ENST00000380742 GGPS1O95749 300 aa21.26■□□□□ 0.99
SMN2-202ENST00000380742 CCL5P13501 91 aa21.26■□□□□ 0.99
SMN2-202ENST00000380742 ARHGAP1Q07960 439 aa21.26■□□□□ 0.99
SMN2-202ENST00000380742 PTPAQ15257 358 aa21.26■□□□□ 0.99
SMN2-202ENST00000380742 FAM20AQ96MK3 541 aa21.26■□□□□ 0.99
SMN2-202ENST00000380742 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.26■□□□□ 0.99
SMN2-202ENST00000380742 DDX20Q9UHI6 824 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms