RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 BARHL2Q9NY43 387 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 PDS5AQ29RF7 1337 aaKnown RBP13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 PSMD14O00487 310 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 RHOBTB3O94955 611 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 CDR1P51861 262 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 RCAN1P53805 252 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 SEC24CP53992 1094 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 POLR2FP61218 127 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 GUCY1A3Q02108 690 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 CALCRLQ16602 461 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 NOC3LQ8WTT2 800 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 FGFBP2Q9BYJ0 223 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 THAP9Q9H5L6 903 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 C6orf50Q9HD87 102 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 C6orf229H3BNL8 230 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 BACH1O14867 736 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 EHHADHQ08426 723 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 MIIPQ5JXC2 388 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 TTBK2Q6IQ55 1244 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 BCS1LQ9Y276 419 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 ATP2C2O75185 946 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 RASA1P20936 1047 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 CDK8P49336 464 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 SEMA3FQ13275 785 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 TTMPQ5BVD1 217 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 CCNI2Q6ZMN8 369 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 FMNL3Q8IVF7 1028 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 SH3GL2Q99962 352 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 MXD3Q9BW11 206 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 ADAMTS1Q9UHI8 967 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 NFU1Q9UMS0 254 aa13.73□□□□□ -0.21
PRPF40B-202ENST00000380281 MEIS1O00470 390 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 CHD4Q14839 1912 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 TCERG1LQ5VWI1 586 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 KCTD1Q719H9 257 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 SPATA4Q8NEY3 305 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 TACO1Q9BSH4 297 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 RBM12Q9NTZ6 932 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 BICDL2A1A5D9 508 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 E9PMD0 336 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 BAG3O95817 575 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 GCKP35557 465 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 EPS15P42566 896 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 VAV2P52735 878 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 GUCY2DQ02846 1103 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 HLTFQ14527 1009 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 GRM4Q14833 912 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 TPTE2Q6XPS3 522 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 DDX12PQ92771 950 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 MTA3Q9BTC8 594 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 MMTAG2Q9BU76 263 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 PACSIN1Q9BY11 444 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 MYO1AQ9UBC5 1043 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 TOGARAM1Q9Y4F4 1720 aa13.72□□□□□ -0.21
PRPF40B-202ENST00000380281 UFL1O94874 794 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 HPDP32754 393 aaPredicted RBP13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 CKAP4Q07065 602 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 CRYMQ14894 314 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 C11orf91Q3C1V1 193 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 WLSQ5T9L3 541 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 NAA35Q5VZE5 725 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 C8orf74Q6P047 294 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 FAM228AQ86W67 206 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 TSEN2Q8NCE0 465 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 OSBPL9Q96SU4 736 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 GBP2P32456 591 aaPredicted RBP13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 PAFAH1B1P43034 410 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 SCNN1DP51172 638 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 VWA3BQ502W6 1294 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 DGKHQ86XP1 1220 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 TBC1D5Q92609 795 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 LARP4BQ92615 738 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 DHTKD1Q96HY7 919 aaPredicted RBP13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 CCDC114Q96M63 670 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 PYM1Q9BRP8 204 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 BCAS3Q9H6U6 928 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 VCPKMTQ9H867 229 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 KIF9Q9HAQ2 790 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 EPB41L5Q9HCM4 733 aa13.71□□□□□ -0.21
PRPF40B-202ENST00000380281 STRCP1A6NGW2 1772 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 ZNF142P52746 1687 aaPredicted RBP13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L15C9J2P7 530 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L13C9JLJ4 530 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L11C9JVI0 530 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L18D6R9N7 530 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L22D6RA61 530 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L17D6RBQ6 530 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L19D6RCP7 530 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L20D6RJB6 530 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 RASSF9O75901 435 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 ACTN1P12814 892 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 STAT3P40763 770 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 CACNB3P54284 484 aa13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 HDLBPQ00341 1268 aaKnown RBP13.71□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L24Q0WX57 530 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms