RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 SENP2Q9HC62 589 aa16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 WDR19Q8NEZ3 1342 aa16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 CCDC70Q6NSX1 233 aa16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 USP49Q70CQ1 688 aa16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 SND1Q7KZF4 910 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 IGDCC4Q8TDY8 1250 aa16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 JAKMIP2Q96AA8 810 aa16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 A1CFQ9NQ94 594 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 FAM184BQ9ULE4 1060 aa16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 TNKSO95271 1327 aa16.69■□□□□ 0.26
CCHCR1-201ENST00000376266 UBE2Q2LH0YL09 131 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 OPA1O60313 960 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 TTLL12Q14166 644 aaPredicted RBP16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 CCDC122Q5T0U0 273 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 PAPD7Q5XG87 772 aaKnown RBP16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 APOA5Q6Q788 366 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 NFXL1Q6ZNB6 911 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 CEP95Q96GE4 821 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 SH3GL2Q99962 352 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 REXO2Q9Y3B8 237 aaKnown RBP16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 COBLO75128 1261 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 FNTAP49354 379 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 SEPT2Q15019 361 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 KRT31Q15323 416 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 ENAHQ8N8S7 591 aaPredicted RBP16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 ZNF112Q9UJU3 913 aa16.68■□□□□ 0.26
CCHCR1-201ENST00000376266 ZBTB43O43298 467 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 CASP1P29466 404 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 GUCY1A2P33402 732 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 SSRP1Q08945 709 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 TRIM14Q14142 442 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 ZNF579Q8NAF0 562 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 FAM212AQ96EL1 285 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 CABP5Q9NP86 173 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 ZBTB21Q9ULJ3 1066 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 STX8Q9UNK0 236 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 GOLGA8AA7E2F4 631 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 MEFVO15553 781 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 CTNND1O60716 968 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 FSBPO95073 299 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 AENQ8WTP8 325 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 TMEM87BQ96K49 555 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 TACO1Q9BSH4 297 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 CSRNP2Q9H175 543 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 PCDHB6Q9Y5E3 794 aa16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 SRPRBQ9Y5M8 271 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-201ENST00000376266 ERICH2A1L162 156 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 PPP1R3GB7ZBB8 358 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 SH2B2O14492 632 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 CELF2O95319 508 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 SEC23AQ15436 765 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 NTRK3Q16288 839 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 RILPL1Q5EBL4 403 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 RCSD1Q6JBY9 416 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 DIS3L2Q8IYB7 885 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 RUFY1Q96T51 708 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 CD248Q9HCU0 757 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 TCP11L1Q9NUJ3 509 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 TFR2Q9UP52 801 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 CTNND2Q9UQB3 1225 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 IGKV6D-41A0A0C4DH26 115 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 A6NNZ2 444 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 NT5C2P49902 561 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 C2orf54Q08AI8 447 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 PDCLQ13371 301 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 TUBB8Q3ZCM7 444 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 IQCEQ6IPM2 695 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 SPATS2Q86XZ4 545 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 RRP36Q96EU6 259 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 MYL10Q9BUA6 226 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 MTMR4Q9NYA4 1195 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 TAB2Q9NYJ8 693 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 KCNJ14Q9UNX9 436 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 PLIN4Q96Q06 1357 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 ATXN2Q99700 1313 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 CHUKO15111 745 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 ZNF185O15231 689 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 TOMM70O94826 608 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 COPB1P53618 953 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 ATP2B2Q01814 1243 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 NEDD9Q14511 834 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 WTAPQ15007 396 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 KIAA1328Q86T90 577 aa16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 LIMA1Q9UHB6 759 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-201ENST00000376266 ASNSP08243 561 aa16.65■□□□□ 0.26
CCHCR1-201ENST00000376266 IREB2P48200 963 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-201ENST00000376266 IFIT1BQ5T764 474 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-201ENST00000376266 CST9Q5W186 159 aa16.65■□□□□ 0.26
CCHCR1-201ENST00000376266 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
CCHCR1-201ENST00000376266 JADE2Q9NQC1 790 aa16.65■□□□□ 0.26
CCHCR1-201ENST00000376266 PDE2AO00408 941 aaPredicted RBP16.65■□□□□ 0.26
CCHCR1-201ENST00000376266 ZEB2O60315 1214 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms