RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 DDX25Q9UHL0 483 aaKnown RBP12.62□□□□□ -0.39
PTPN20-204ENST00000374346 GOLGA8KD6RF30 607 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 TRAF5O00463 557 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 SERPING1P05155 500 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 EPS15P42566 896 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 PPFIA1Q13136 1202 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 C8orf74Q6P047 294 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 CCDC65Q8IXS2 484 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 BAP1Q92560 729 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 GLT8D2Q9H1C3 349 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 PCDHA12Q9UN75 941 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 BTAF1O14981 1849 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 A6NNZ2 444 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 EPHB6O15197 1021 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 SLC26A4O43511 780 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 PPFIA4O75335 1185 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 TTLL1O95922 423 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 RHBDL3P58872 404 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 GPSM2P81274 684 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 EHHADHQ08426 723 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 SF3B2Q13435 895 aaKnown RBP12.61□□□□□ -0.39
PTPN20-204ENST00000374346 TUBB8Q3ZCM7 444 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 SND1Q7KZF4 910 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTPN20-204ENST00000374346 LRRC1Q9BTT6 524 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 PANK4Q9NVE7 773 aa12.61□□□□□ -0.39
PTPN20-204ENST00000374346 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 GAKO14976 1311 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 RBAK-RBAKDNI3L0D1 243 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 TNFRSF8P28908 595 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 MATR3P43243 847 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPN20-204ENST00000374346 RASSF7Q02833 373 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 GFPT1Q06210 699 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-204ENST00000374346 COASYQ13057 564 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 FAM26FQ5R3K3 315 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 ALS2CLQ60I27 953 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 NFRKBQ6P4R8 1299 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 LRRC31Q6UY01 552 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 GSPT2Q8IYD1 628 aaKnown RBP12.6□□□□□ -0.39
PTPN20-204ENST00000374346 FAM107BQ9H098 131 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 RSPH14Q9UHP6 348 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 NHSQ6T4R5 1651 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 ZC3H4Q9UPT8 1303 aaKnown RBP12.6□□□□□ -0.39
PTPN20-204ENST00000374346 HSF2BPO75031 334 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 SNHG28P0DPA3 235 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 MYBL2P10244 700 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 ASTE1Q2TB18 679 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-204ENST00000374346 GPATCH4Q5T3I0 446 aaKnown RBP12.6□□□□□ -0.39
PTPN20-204ENST00000374346 IFT20Q8IY31 132 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 C10orf67Q8IYJ2 551 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 RBM17Q96I25 401 aaKnown RBP12.6□□□□□ -0.39
PTPN20-204ENST00000374346 SWAP70Q9UH65 585 aa12.6□□□□□ -0.39
PTPN20-204ENST00000374346 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPN20-204ENST00000374346 NKRFO15226 690 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPN20-204ENST00000374346 LRRC41Q15345 812 aa12.59□□□□□ -0.39
PTPN20-204ENST00000374346 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
PTPN20-204ENST00000374346 GPR101Q96P66 508 aaPredicted RBP12.59□□□□□ -0.39
PTPN20-204ENST00000374346 GPCPD1Q9NPB8 672 aa12.59□□□□□ -0.39
PTPN20-204ENST00000374346 SSBP05455 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPN20-204ENST00000374346 CXCR5P32302 372 aa12.59□□□□□ -0.39
PTPN20-204ENST00000374346 NNTQ13423 1086 aa12.59□□□□□ -0.39
PTPN20-204ENST00000374346 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
PTPN20-204ENST00000374346 FAM83BQ5T0W9 1011 aa12.59□□□□□ -0.39
PTPN20-204ENST00000374346 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
PTPN20-204ENST00000374346 RIN2Q8WYP3 895 aaPredicted RBP12.59□□□□□ -0.39
PTPN20-204ENST00000374346 NLRC4Q9NPP4 1024 aa12.59□□□□□ -0.39
PTPN20-204ENST00000374346 TMEM51Q9NW97 253 aa12.59□□□□□ -0.39
PTPN20-204ENST00000374346 MYO3BQ8WXR4 1341 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 KDM4FA0A1W2PPD8 638 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 GRID2IPA4D2P6 1211 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 AGPSO00116 658 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 SHOX2O60902 331 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-204ENST00000374346 BBOX1O75936 387 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 SLC1A4P43007 532 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 MARSP56192 900 aaKnown RBP12.58□□□□□ -0.4
PTPN20-204ENST00000374346 ZNF543Q08ER8 600 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 ZCWPW2Q504Y3 356 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 HYIQ5T013 277 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 ADGRF4Q8IZF3 695 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 CAVIN3Q969G5 261 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 DNAJC19Q96DA6 116 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 PSMB7Q99436 277 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 TRIM34Q9BYJ4 488 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 PSTPIP2Q9H939 334 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 DMGDHQ9UI17 866 aaKnown RBP12.58□□□□□ -0.4
PTPN20-204ENST00000374346 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 MYH7BA7E2Y1 1941 aa12.58□□□□□ -0.4
PTPN20-204ENST00000374346 TAF1LQ8IZX4 1826 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 ZBTB5O15062 677 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 BUB1O43683 1085 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 CLSTN1O94985 981 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 KRT18P05783 430 aaKnown RBP12.57□□□□□ -0.4
PTPN20-204ENST00000374346 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
PTPN20-204ENST00000374346 APBA1Q02410 837 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 KCNMA1Q12791 1236 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 PICALMQ13492 652 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 VPS72Q15906 364 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 SLC18A3Q16572 532 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 C10orf76Q5T2E6 689 aa12.57□□□□□ -0.4
PTPN20-204ENST00000374346 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms