RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SEPT2Q15019 361 aa14.12□□□□□ -0.15
CTPS1-202ENST00000372621 HYIQ5T013 277 aa14.12□□□□□ -0.15
CTPS1-202ENST00000372621 SLF2Q8IX21 1173 aa14.12□□□□□ -0.15
CTPS1-202ENST00000372621 LRRC47Q8N1G4 583 aaKnown RBP14.12□□□□□ -0.15
CTPS1-202ENST00000372621 TLR10Q9BXR5 811 aa14.12□□□□□ -0.15
CTPS1-202ENST00000372621 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
CTPS1-202ENST00000372621 PNMA6FA0A0J9YX94 578 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 MAGEA1P43355 309 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 ATP2B2Q01814 1243 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 GFPT1Q06210 699 aaPredicted RBP14.11□□□□□ -0.15
CTPS1-202ENST00000372621 COASYQ13057 564 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 TRAPPC3LQ5T215 181 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.11□□□□□ -0.15
CTPS1-202ENST00000372621 MYOCDQ8IZQ8 938 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 MTMR8Q96EF0 704 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 ALS2CR12Q96Q35 445 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 TSG101Q99816 390 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 PODXL2Q9NZ53 605 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 MYO1CO00159 1063 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 AKR1B1P15121 316 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 KLHDC7AQ5VTJ3 777 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 SYN2Q92777 582 aaPredicted RBP14.11□□□□□ -0.15
CTPS1-202ENST00000372621 DRC1Q96MC2 740 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 PCDHA2Q9Y5H9 948 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 COL4A3BPQ9Y5P4 624 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 TLR2O60603 784 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 MARSP56192 900 aaKnown RBP14.11□□□□□ -0.15
CTPS1-202ENST00000372621 FKBP3Q00688 224 aaKnown RBP14.11□□□□□ -0.15
CTPS1-202ENST00000372621 ZNF543Q08ER8 600 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 CCDC70Q6NSX1 233 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 ADGRF4Q8IZF3 695 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 RNF10Q8N5U6 811 aaKnown RBP14.11□□□□□ -0.15
CTPS1-202ENST00000372621 TBC1D22AQ8WUA7 517 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 CRACR2AQ9BSW2 395 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 CEP72Q9P209 647 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 POLLQ9UGP5 575 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 DDX25Q9UHL0 483 aaKnown RBP14.11□□□□□ -0.15
CTPS1-202ENST00000372621 DAGLAQ9Y4D2 1042 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 QSER1Q2KHR3 1735 aa14.11□□□□□ -0.15
CTPS1-202ENST00000372621 LTBP4Q8N2S1 1624 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 MYH4Q9Y623 1939 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 SHOX2O60902 331 aaPredicted RBP14.1□□□□□ -0.15
CTPS1-202ENST00000372621 SLC1A4P43007 532 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 UBE2SQ16763 222 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 HAUS3Q68CZ6 603 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
CTPS1-202ENST00000372621 RRP15Q9Y3B9 282 aaKnown RBP14.1□□□□□ -0.15
CTPS1-202ENST00000372621 LRRC37AA6NMS7 1700 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 THSD7AQ9UPZ6 1657 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 ERCC3P19447 782 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 TNFRSF8P28908 595 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 TNNI2P48788 182 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 CLEC10AQ8IUN9 316 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 FGFBP2Q9BYJ0 223 aa14.1□□□□□ -0.15
CTPS1-202ENST00000372621 NCK2O43639 380 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 CXCR5P32302 372 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 RASSF7Q02833 373 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 TBC1D16Q8TBP0 767 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 GJA10Q969M2 543 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 GPCPD1Q9NPB8 672 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 SMARCAL1Q9NZC9 954 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 EHD2Q9NZN4 543 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 GOLGA6BA6NDN3 693 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 TTLL1O95922 423 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 CACNA2D4Q7Z3S7 1137 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 ZC3H3Q8IXZ2 948 aaKnown RBP14.09□□□□□ -0.15
CTPS1-202ENST00000372621 CEP63Q96MT8 703 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 SH3GL2Q99962 352 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 NUCKS1Q9H1E3 243 aaKnown RBP14.09□□□□□ -0.15
CTPS1-202ENST00000372621 PANK4Q9NVE7 773 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
CTPS1-202ENST00000372621 EIF6P56537 245 aaKnown RBP14.09□□□□□ -0.15
CTPS1-202ENST00000372621 FAM26FQ5R3K3 315 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 FAM83BQ5T0W9 1011 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 DPP8Q6V1X1 898 aaPredicted RBP14.09□□□□□ -0.15
CTPS1-202ENST00000372621 GPIHBP1Q8IV16 184 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 TRIM59Q8IWR1 403 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 ANKRD13CQ8N6S4 541 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 GOLGA6L1Q8N7Z2 621 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 NOX5Q96PH1 765 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 HINFPQ9BQA5 517 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 STIM2Q9P246 746 aa14.09□□□□□ -0.15
CTPS1-202ENST00000372621 SERPING1P05155 500 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 GCFC2P16383 781 aaKnown RBP14.08□□□□□ -0.16
CTPS1-202ENST00000372621 CUL5Q93034 780 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 DDX4Q9NQI0 724 aaKnown RBP14.08□□□□□ -0.16
CTPS1-202ENST00000372621 A0A0U1RQG5 324 aaPredicted RBP14.08□□□□□ -0.16
CTPS1-202ENST00000372621 TRAF5O00463 557 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 TRIM66O15016 1216 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 SLC7A5Q01650 507 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 SLC9C1Q4G0N8 1177 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 TTBK2Q6IQ55 1244 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 FAM196AQ6ZSG2 479 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 SND1Q7KZF4 910 aaKnown RBP eCLIP14.08□□□□□ -0.16
CTPS1-202ENST00000372621 PSMB7Q99436 277 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 TANGO6Q9C0B7 1094 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 NT5C3AQ9H0P0 336 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 KCTD10Q9H3F6 313 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 TSKSQ9UJT2 592 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 PCDHA12Q9UN75 941 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms