RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SKA1Q96BD8 255 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 ZIM3Q96PE6 472 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 GOLGA8AA7E2F4 631 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 CHMP2AO43633 222 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 ITIH3Q06033 890 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 TNIP1Q15025 636 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 SPATA1Q5VX52 437 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 LRIG3Q6UXM1 1119 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 DZIP3Q86Y13 1208 aaKnown RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 CROCCP3Q8IVE0 287 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 LRRC37BQ96QE4 947 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 LRRC27Q9C0I9 530 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 EHD4Q9H223 541 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 DPH5Q9H2P9 285 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 ANLNQ9NQW6 1124 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 MTMR7Q9Y216 660 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 ARL1P40616 181 aaPredicted RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 ABL2P42684 1182 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 HSPA2P54652 639 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 OCA2Q04671 838 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 STRN3Q13033 797 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 IFIT5Q13325 482 aaKnown RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 SLC9C1Q4G0N8 1177 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 PIGOQ8TEQ8 1089 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 RUNDC3BQ96NL0 473 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 TMEM60Q9H2L4 133 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 SYCE1LA8MT33 242 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 KRIT1O00522 736 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 MFAP3LO75121 409 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 IFIT1P09914 478 aaKnown RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 ZCCHC18P0CG32 403 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 CD151P48509 253 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 KIF11P52732 1056 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 TUBA3CQ13748 450 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 CLUL1Q15846 466 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 STKLD1Q8NE28 680 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 OSBPL10Q9BXB5 764 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 FGFR1OP2Q9NVK5 253 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 PLA2R1Q13018 1463 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 HNRNPCL1O60812 293 aaKnown RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 CBFA2T3O75081 653 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 EIF2S1P05198 315 aaKnown RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 KRT2P35908 639 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 IGBP1P78318 339 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 LBRQ14739 615 aaKnown RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 ZMYM1Q5SVZ6 1142 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 EHD2Q9NZN4 543 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 SEL1LQ9UBV2 794 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 SAP30BPQ9UHR5 308 aaKnown RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 THRAP3Q9Y2W1 955 aaKnown RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 PREX2Q70Z35 1606 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 MAGI2Q86UL8 1455 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 ATP9AO75110 1047 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 MBD4O95243 580 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 CAPN1P07384 714 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 TPD52P55327 224 aaPredicted RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 GALNT17Q6IS24 598 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 NCCRP1Q6ZVX7 275 aaPredicted RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 COPS6Q7L5N1 327 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 RBBP8NLQ8NC74 664 aaPredicted RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 NEK9Q8TD19 979 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 ARL8AQ96BM9 186 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 MMS19Q96T76 1030 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 TRMT112Q9UI30 125 aaKnown RBP11.29□□□□□ -0.6
PRDM1-201ENST00000369089 MLH3Q9UHC1 1453 aa11.29□□□□□ -0.6
PRDM1-201ENST00000369089 ERCC6L2Q5T890 1561 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 PLEKHG3A1L390 1219 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 DPPA5A6NC42 116 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 KRT8P05787 483 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 ESRRAP11474 423 aaPredicted RBP11.28□□□□□ -0.6
PRDM1-201ENST00000369089 PLCD1P51178 756 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 XAGE3Q8WTP9 111 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 OMA1Q96E52 524 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 MTA3Q9BTC8 594 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 PITPNM3Q9BZ71 974 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 CHD1O14646 1710 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 GOLGA8CPA6NN73 597 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 CYP11B2P19099 503 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 USP46P62068 366 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 PAK1Q13153 545 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 ANKRD20A4Q4UJ75 823 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 KRT80Q6KB66 452 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 KLHL25Q9H0H3 589 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 TRIM64CA6NLI5 447 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 SRRM3A6NNA2 597 aaPredicted RBP11.28□□□□□ -0.6
PRDM1-201ENST00000369089 STAT6P42226 847 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 USH1GQ495M9 461 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 TMC5Q6UXY8 1006 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 GRAMD1AQ96CP6 724 aa11.28□□□□□ -0.6
PRDM1-201ENST00000369089 DBNLQ9UJU6 430 aaKnown RBP11.28□□□□□ -0.6
PRDM1-201ENST00000369089 RPAP1Q9BWH6 1393 aaPredicted RBP11.28□□□□□ -0.6
PRDM1-201ENST00000369089 RASSF9O75901 435 aa11.27□□□□□ -0.6
PRDM1-201ENST00000369089 SYF2O95926 243 aaKnown RBP11.27□□□□□ -0.6
PRDM1-201ENST00000369089 KRT18P05783 430 aaKnown RBP11.27□□□□□ -0.6
PRDM1-201ENST00000369089 KRT15P19012 456 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms