RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 SIGLEC1Q9BZZ2 1709 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 MROH2AA6NES4 1674 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 FLOT1O75955 427 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 FDPSP14324 419 aaKnown RBP11.8□□□□□ -0.52
EBF3-202ENST00000368648 CYP4F22Q6NT55 531 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 CLEC4GQ6UXB4 293 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 PHLDB2Q86SQ0 1253 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 CCDC65Q8IXS2 484 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 SPATA4Q8NEY3 305 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 ARL8AQ96BM9 186 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 SAAL1Q96ER3 474 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 TRIM4Q9C037 500 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 GOLPH3Q9H4A6 298 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 HPCAL4Q9UM19 191 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 LEMD3Q9Y2U8 911 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 IQGAP1P46940 1657 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 POC1B-GALNT4F8VUJ3 575 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 FAM13AO94988 1023 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 PTPREP23469 700 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 MTMR3Q13615 1198 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 DEFB132Q7Z7B7 95 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 DDX42Q86XP3 938 aaKnown RBP eCLIP11.8□□□□□ -0.52
EBF3-202ENST00000368648 TBC1D10CQ8IV04 446 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 LRRC47Q8N1G4 583 aaKnown RBP11.8□□□□□ -0.52
EBF3-202ENST00000368648 BICD1Q96G01 975 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 DDX23Q9BUQ8 820 aaKnown RBP11.8□□□□□ -0.52
EBF3-202ENST00000368648 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.8□□□□□ -0.52
EBF3-202ENST00000368648 DIP2AQ14689 1571 aa11.8□□□□□ -0.52
EBF3-202ENST00000368648 SPATA31A1Q5TZJ5 1347 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 PALMO75781 387 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 R3HDM1Q15032 1099 aaKnown RBP11.79□□□□□ -0.52
EBF3-202ENST00000368648 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 RFX8Q6ZV50 586 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 SPATS2Q86XZ4 545 aaKnown RBP11.79□□□□□ -0.52
EBF3-202ENST00000368648 GJA10Q969M2 543 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 VCXQ9H320 206 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 HOMER3Q9NSC5 361 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 PNPLA6Q8IY17 1366 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 PLEKHA8P1O95397 391 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 ACSL3O95573 720 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 CFBP00751 764 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 TNFAIP1Q13829 316 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 ANKRD20A3Q5VUR7 823 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 PARP9Q8IXQ6 854 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 BLIDQ8IZY5 108 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 TCHPQ9BT92 498 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 VPS37BQ9H9H4 285 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 SNX24Q9Y343 169 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 SRPRBQ9Y5M8 271 aaKnown RBP11.79□□□□□ -0.52
EBF3-202ENST00000368648 UBR1Q8IWV7 1749 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 H7C1W4 665 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 KRT5P13647 590 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 MRPL12P52815 198 aaKnown RBP11.79□□□□□ -0.52
EBF3-202ENST00000368648 DALRD3Q5D0E6 543 aaKnown RBP11.79□□□□□ -0.52
EBF3-202ENST00000368648 CNPY4Q8N129 248 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 LRRC27Q9C0I9 530 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 ZBED6P86452 979 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 GRAPQ13588 217 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 NFIXQ14938 502 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 NONOQ15233 471 aaKnown RBP eCLIP11.79□□□□□ -0.52
EBF3-202ENST00000368648 CCDC93Q567U6 631 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 NAIF1Q69YI7 327 aaPredicted RBP11.79□□□□□ -0.52
EBF3-202ENST00000368648 TRIM65Q6PJ69 517 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
EBF3-202ENST00000368648 PAGR1Q9BTK6 254 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 DMGDHQ9UI17 866 aaKnown RBP11.79□□□□□ -0.52
EBF3-202ENST00000368648 CSADQ9Y600 493 aa11.79□□□□□ -0.52
EBF3-202ENST00000368648 POLR1AO95602 1720 aaPredicted RBP11.78□□□□□ -0.52
EBF3-202ENST00000368648 GMNCA6NCL1 334 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 SH2B2O14492 632 aaPredicted RBP11.78□□□□□ -0.52
EBF3-202ENST00000368648 EIF3HO15372 352 aaKnown RBP eCLIP11.78□□□□□ -0.52
EBF3-202ENST00000368648 DIAPH2O60879 1101 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 PPP1R37O75864 691 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 H2AFZP0C0S5 128 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 CARSP49589 748 aaKnown RBP11.78□□□□□ -0.52
EBF3-202ENST00000368648 EMBQ6PCB8 327 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 H2AFVQ71UI9 128 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 KIF2BQ8N4N8 673 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 ABTB1Q969K4 478 aaPredicted RBP11.78□□□□□ -0.52
EBF3-202ENST00000368648 OSBPL9Q96SU4 736 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 PSMD1Q99460 953 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 RBM28Q9NW13 759 aaKnown RBP11.78□□□□□ -0.52
EBF3-202ENST00000368648 IVNS1ABPQ9Y6Y0 642 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 LRRN2O75325 713 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 MMEP08473 750 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 MESDQ14696 234 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 CALCRLQ16602 461 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 CCDC13Q8IYE1 715 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 RETREG2Q8NC44 543 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 CFAP61Q8NHU2 1237 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 OVOS2A0A0G2JMS6 1433 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 OVOS2A0A0J9YW53 1432 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 TECPR2O15040 1411 aa11.78□□□□□ -0.52
EBF3-202ENST00000368648 OVOS2Q6IE36 1432 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms