RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 UPF3AQ9H1J1 476 aaKnown RBP9.6□□□□□ -0.87
CTNND1-201ENST00000358694 TXLNGQ9NUQ3 528 aa9.6□□□□□ -0.87
CTNND1-201ENST00000358694 MT-ND3P03897 115 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 USP14P54578 494 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 EXOC3L4Q17RC7 722 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 DCAF4L1Q3SXM0 396 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 NAF1Q96HR8 494 aaKnown RBP9.59□□□□□ -0.87
CTNND1-201ENST00000358694 ZNF577Q9BSK1 485 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 SPZ1Q9BXG8 430 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 CAPS2Q9BXY5 557 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 PRDM5Q9NQX1 630 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-201ENST00000358694 LRCH2Q5VUJ6 765 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 CYP4F22Q6NT55 531 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 EEPD1Q7L9B9 569 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 SMAP1Q8IYB5 467 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-201ENST00000358694 FARP1Q9Y4F1 1045 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-201ENST00000358694 FLT4P35916 1363 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 CLRN2A0PK11 232 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 USP17L12C9JPN9 530 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 USP17L21D6R901 530 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 ARL4DP49703 201 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 RPS8P62241 208 aaKnown RBP9.59□□□□□ -0.87
CTNND1-201ENST00000358694 SUPT20HL1Q3ZLR7 823 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 YAF2Q8IY57 180 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 THEM5Q8N1Q8 247 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 OTULINQ96BN8 352 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 HPCAL4Q9UM19 191 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 SYCE1LA8MT33 242 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 CCND2P30279 289 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 BTDP43251 543 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 TRIM60Q495X7 471 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 DNAJC24Q6P3W2 148 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 FAM173BQ6P4H8 233 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 FAM180AQ6UWF9 173 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 TADA2BQ86TJ2 420 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 MAGOHBQ96A72 148 aaKnown RBP9.59□□□□□ -0.87
CTNND1-201ENST00000358694 VPS39Q96JC1 886 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 DCTPP1Q9H773 170 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 INTS9Q9NV88 658 aaKnown RBP9.59□□□□□ -0.87
CTNND1-201ENST00000358694 NCKAP5LQ9HCH0 1330 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 UBXN8O00124 270 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 PAMP19021 973 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 HIF1AQ16665 826 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 ZNF790Q6PG37 636 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 SPICE1Q8N0Z3 855 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 GPKOWQ92917 476 aaPredicted RBP eCLIP9.59□□□□□ -0.87
CTNND1-201ENST00000358694 IFT43Q96FT9 208 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 SERPINI1Q99574 410 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 C14orf93Q9H972 538 aaKnown RBP9.59□□□□□ -0.87
CTNND1-201ENST00000358694 KIF17Q9P2E2 1029 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 MID2Q9UJV3 735 aa9.59□□□□□ -0.87
CTNND1-201ENST00000358694 KLRF2D3W0D1 207 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 RASGRF2O14827 1237 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 PRPF4O43172 522 aaKnown RBP eCLIP9.58□□□□□ -0.884e-8■□□□□ 10.4
CTNND1-201ENST00000358694 CAPZA2P47755 286 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 BCAMP50895 628 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 SNCBQ16143 134 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 ACCSLQ4AC99 568 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 KIAA1755Q5JYT7 1200 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 TEX9Q8N6V9 391 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 FAM227BQ96M60 508 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 SERPINI2O75830 405 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 A1BGP04217 495 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 SLMAPQ14BN4 828 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 ZKSCAN8Q15776 578 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-201ENST00000358694 SGO2Q562F6 1265 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 RRM2BQ7LG56 351 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 PPHLN1Q8NEY8 458 aaKnown RBP9.58□□□□□ -0.88
CTNND1-201ENST00000358694 CNKSR1Q969H4 720 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 UBN2Q6ZU65 1347 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 SRGAP2CP0DJJ0 459 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 PAPOLAP51003 745 aaKnown RBP9.58□□□□□ -0.88
CTNND1-201ENST00000358694 EHHADHQ08426 723 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 ANO4Q32M45 955 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 STX19Q8N4C7 294 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 TMCO5AQ8N6Q1 288 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 ULK4Q96C45 1275 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 LRRC37BQ96QE4 947 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 GIMAP4Q9NUV9 329 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 PCDHB15Q9Y5E8 787 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 MOCS3O95396 460 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 CD58P19256 250 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 KRT24Q2M2I5 525 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 TJAP1Q5JTD0 557 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 OR9Q1Q8NGQ5 310 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 ZC3H15Q8WU90 426 aaKnown RBP9.58□□□□□ -0.88
CTNND1-201ENST00000358694 PHACTR3Q96KR7 559 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 ACCSQ96QU6 501 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 TRPC5Q9UL62 973 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-201ENST00000358694 L3MBTL1Q9Y468 752 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 NDUFB9Q9Y6M9 179 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 KRT87PA6NCN2 255 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 EFCAB8A8MWE9 144 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 MECOMQ03112 1051 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 FAM26FQ5R3K3 315 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 SPATS2Q86XZ4 545 aaKnown RBP9.58□□□□□ -0.88
CTNND1-201ENST00000358694 PBXIP1Q96AQ6 731 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 CEP170P1Q96L14 293 aa9.58□□□□□ -0.88
CTNND1-201ENST00000358694 KIAA1024Q9UPX6 916 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms