RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 GCFC2P16383 781 aaKnown RBP16.88■□□□□ 0.29
CCNE1-202ENST00000357943 MCM7P33993 719 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 CCDC144BQ3MJ40 725 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 Q4G0T1 1027 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 NLRX1Q86UT6 975 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 PLA2G4DQ86XP0 818 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 POTEDQ86YR6 584 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 GPRASP2Q96D09 838 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 CHMP5Q9NZZ3 219 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 SPATA31C2B4DYI2 1134 aa16.87■□□□□ 0.29
CCNE1-202ENST00000357943 ADCY6O43306 1168 aa16.87■□□□□ 0.29
CCNE1-202ENST00000357943 FIBPO43427 364 aa16.87■□□□□ 0.29
CCNE1-202ENST00000357943 PTGS1P23219 599 aa16.87■□□□□ 0.29
CCNE1-202ENST00000357943 CCND3P30281 292 aaPredicted RBP16.87■□□□□ 0.29
CCNE1-202ENST00000357943 ICAM3P32942 547 aa16.87■□□□□ 0.29
CCNE1-202ENST00000357943 SETQ01105 290 aaPredicted RBP16.87■□□□□ 0.29
CCNE1-202ENST00000357943 NIPA1Q7RTP0 329 aa16.87■□□□□ 0.29
CCNE1-202ENST00000357943 CHAMP1Q96JM3 812 aa16.87■□□□□ 0.29
CCNE1-202ENST00000357943 NAP1L4Q99733 375 aaKnown RBP16.87■□□□□ 0.29
CCNE1-202ENST00000357943 NRBP1Q9UHY1 535 aa16.87■□□□□ 0.29
CCNE1-202ENST00000357943 MRVI1Q9Y6F6 885 aa16.87■□□□□ 0.29
CCNE1-202ENST00000357943 RBM47A0AV96 593 aaKnown RBP16.86■□□□□ 0.29
CCNE1-202ENST00000357943 ATP9AO75110 1047 aa16.86■□□□□ 0.29
CCNE1-202ENST00000357943 SP2Q02086 613 aa16.86■□□□□ 0.29
CCNE1-202ENST00000357943 LY6KQ17RY6 165 aa16.86■□□□□ 0.29
CCNE1-202ENST00000357943 CCDC62Q6P9F0 684 aa16.86■□□□□ 0.29
CCNE1-202ENST00000357943 SCFD2Q8WU76 684 aa16.86■□□□□ 0.29
CCNE1-202ENST00000357943 GJA10Q969M2 543 aa16.86■□□□□ 0.29
CCNE1-202ENST00000357943 USP28Q96RU2 1077 aa16.86■□□□□ 0.29
CCNE1-202ENST00000357943 TMEM60Q9H2L4 133 aa16.86■□□□□ 0.29
CCNE1-202ENST00000357943 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.86■□□□□ 0.29
CCNE1-202ENST00000357943 PKD2L1Q9P0L9 805 aa16.86■□□□□ 0.29
CCNE1-202ENST00000357943 MSH4O15457 936 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 MAFGO15525 162 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 NEMFO60524 1076 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 CNGA1P29973 690 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 CEBPZQ03701 1054 aaKnown RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 GJC2Q5T442 439 aaPredicted RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 ETNPPLQ8TBG4 499 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 CDHR1Q96JP9 859 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 BCAS3Q9H6U6 928 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 AGO4Q9HCK5 861 aaKnown RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 DDX41Q9UJV9 622 aaKnown RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 CLIC4Q9Y696 253 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 MKI67P46013 3256 aaKnown RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 MYCP01106 439 aaPredicted RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 TXNP10599 105 aaKnown RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 TGFB3P10600 412 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 KCNA2P16389 499 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 SMPD1P17405 629 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 UBA1P22314 1058 aaKnown RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 DNM1Q05193 864 aaKnown RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 TTLL4Q14679 1199 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 MTFR1Q15390 333 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 SF3A1Q15459 793 aaKnown RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 ANO1Q5XXA6 986 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 IQSEC1Q6DN90 963 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 HAS1Q92839 578 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 COPS5Q92905 334 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 LENG1Q96BZ8 264 aaPredicted RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 ZNF577Q9BSK1 485 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 MCOLN1Q9GZU1 580 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 KCNMB3Q9NPA1 279 aa16.85■□□□□ 0.29
CCNE1-202ENST00000357943 TFIP11Q9UBB9 837 aaKnown RBP16.85■□□□□ 0.29
CCNE1-202ENST00000357943 IPO5O00410 1097 aaKnown RBP16.84■□□□□ 0.29
CCNE1-202ENST00000357943 SEPT4O43236 478 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 SORBS3O60504 671 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 AKR1A1P14550 325 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 PTGDRQ13258 359 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 ITGB3BPQ13352 177 aaPredicted RBP16.84■□□□□ 0.29
CCNE1-202ENST00000357943 ORC2Q13416 577 aaPredicted RBP16.84■□□□□ 0.29
CCNE1-202ENST00000357943 CALCRLQ16602 461 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 KCNV1Q6PIU1 500 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 C4orf32Q8N8J7 132 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 MTMR9Q96QG7 549 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 HMX1Q9NP08 348 aaPredicted RBP16.84■□□□□ 0.29
CCNE1-202ENST00000357943 FAM184BQ9ULE4 1060 aa16.84■□□□□ 0.29
CCNE1-202ENST00000357943 DUSP28Q4G0W2 176 aa16.83■□□□□ 0.28
CCNE1-202ENST00000357943 SENP7Q9BQF6 1050 aa16.83■□□□□ 0.28
CCNE1-202ENST00000357943 GNEQ9Y223 722 aaKnown RBP16.83■□□□□ 0.28
CCNE1-202ENST00000357943 ATP6V1DQ9Y5K8 247 aa16.83■□□□□ 0.28
CCNE1-202ENST00000357943 KIAA1217Q5T5P2 1943 aa16.83■□□□□ 0.28
CCNE1-202ENST00000357943 DHX15O43143 795 aaKnown RBP16.82■□□□□ 0.28
CCNE1-202ENST00000357943 CYFIP1Q7L576 1253 aa16.82■□□□□ 0.28
CCNE1-202ENST00000357943 SLC5A5Q92911 643 aa16.82■□□□□ 0.28
CCNE1-202ENST00000357943 ZNF333Q96JL9 665 aa16.82■□□□□ 0.28
CCNE1-202ENST00000357943 ZNF396Q96N95 335 aaPredicted RBP16.82■□□□□ 0.28
CCNE1-202ENST00000357943 UNC93B1Q9H1C4 597 aa16.82■□□□□ 0.28
CCNE1-202ENST00000357943 POLR3EQ9NVU0 708 aa16.82■□□□□ 0.28
CCNE1-202ENST00000357943 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
CCNE1-202ENST00000357943 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 DDX39AO00148 427 aaKnown RBP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 TBX3O15119 743 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 MARCH6O60337 910 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 GGPS1O95749 300 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 ATP2C1P98194 919 aaPredicted RBP16.81■□□□□ 0.28
CCNE1-202ENST00000357943 NEDD9Q14511 834 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 PTPAQ15257 358 aa16.81■□□□□ 0.28
CCNE1-202ENST00000357943 ARMC5Q96C12 935 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms