RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 TCTN1Q2MV58 587 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 TRIM71Q2Q1W2 868 aaKnown RBP11.86□□□□□ -0.51
LINC01560-201ENST00000357412 KCNV1Q6PIU1 500 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 LRRC8DQ7L1W4 858 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 CCDC155Q8N6L0 562 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 NCOA7Q8NI08 942 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 IGDCC4Q8TDY8 1250 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 GPKOWQ92917 476 aaPredicted RBP eCLIP11.86□□□□□ -0.51
LINC01560-201ENST00000357412 WNT8BQ93098 351 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 ZFP91Q96JP5 570 aaPredicted RBP11.86□□□□□ -0.51
LINC01560-201ENST00000357412 SPATA33Q96N06 139 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 CERS4Q9HA82 394 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 PLXNA1Q9UIW2 1896 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 ERICH2A1L162 156 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 SORBS3O60504 671 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 GGPS1O95749 300 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 TGFB3P10600 412 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 POU3F3P20264 500 aaPredicted RBP11.85□□□□□ -0.51
LINC01560-201ENST00000357412 MRPS5P82675 430 aaKnown RBP11.85□□□□□ -0.51
LINC01560-201ENST00000357412 TAP1Q03518 808 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 TRAF1Q13077 416 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 PTK7Q13308 1070 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 RALYLQ86SE5 291 aaKnown RBP11.85□□□□□ -0.51
LINC01560-201ENST00000357412 FCHSD1Q86WN1 690 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
LINC01560-201ENST00000357412 MAP4K1Q92918 833 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 C16orf70Q9BSU1 422 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 MTCH2Q9Y6C9 303 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 MYH4Q9Y623 1939 aa11.85□□□□□ -0.51
LINC01560-201ENST00000357412 LRRC37A2A6NM11 1700 aa11.84□□□□□ -0.51
LINC01560-201ENST00000357412 KIF28PB7ZC32 967 aa11.84□□□□□ -0.51
LINC01560-201ENST00000357412 PARNO95453 639 aaKnown RBP11.84□□□□□ -0.51
LINC01560-201ENST00000357412 CCND2P30279 289 aa11.84□□□□□ -0.51
LINC01560-201ENST00000357412 WDR5P61964 334 aaKnown RBP11.84□□□□□ -0.51
LINC01560-201ENST00000357412 MRPS9P82933 396 aaKnown RBP11.84□□□□□ -0.51
LINC01560-201ENST00000357412 MBTPS1Q14703 1052 aa11.84□□□□□ -0.51
LINC01560-201ENST00000357412 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
LINC01560-201ENST00000357412 SPRED2Q7Z698 418 aa11.84□□□□□ -0.51
LINC01560-201ENST00000357412 TMCO2Q7Z6W1 182 aaPredicted RBP11.84□□□□□ -0.51
LINC01560-201ENST00000357412 CATIPQ7Z7H3 387 aa11.84□□□□□ -0.51
LINC01560-201ENST00000357412 BCAS3Q9H6U6 928 aa11.84□□□□□ -0.51
LINC01560-201ENST00000357412 CHD7Q9P2D1 2997 aa11.84□□□□□ -0.51
LINC01560-201ENST00000357412 LCHNA4D1U4 455 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 TNFRSF10AO00220 468 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 TLL1O43897 1013 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 HOXC8P31273 242 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 ICAM3P32942 547 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 KCNJ6P48051 423 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
LINC01560-201ENST00000357412 DEFB103AP81534 67 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 ZNF618Q5T7W0 954 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 KRT40Q6A162 431 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 CNKSR3Q6P9H4 555 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 MICALL1Q8N3F8 863 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 ARNTL2Q8WYA1 636 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 INPP4AQ96PE3 977 aaPredicted RBP11.83□□□□□ -0.52
LINC01560-201ENST00000357412 MLXIPQ9HAP2 919 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 LY9Q9HBG7 655 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 RBM8AQ9Y5S9 174 aaKnown RBP11.83□□□□□ -0.52
LINC01560-201ENST00000357412 FRMPD4Q14CM0 1322 aa11.83□□□□□ -0.52
LINC01560-201ENST00000357412 ABHD14A-ACY1A0A1B0GW23 586 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 SPATA31C2B4DYI2 1134 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 LPXNO60711 386 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 GJB5O95377 273 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 MKRN4PQ13434 485 aaPredicted RBP11.82□□□□□ -0.52
LINC01560-201ENST00000357412 COL9A3Q14050 684 aaPredicted RBP11.82□□□□□ -0.52
LINC01560-201ENST00000357412 SERINC5Q86VE9 423 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 ADAMTS19Q8TE59 1207 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 SPZ1Q9BXG8 430 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 LSG1Q9H089 658 aaKnown RBP11.82□□□□□ -0.52
LINC01560-201ENST00000357412 RTEL1Q9NZ71 1219 aa11.82□□□□□ -0.52
LINC01560-201ENST00000357412 MCM3APO60318 1980 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 C17orf102A2RUQ5 167 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 H3BRB1 525 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
LINC01560-201ENST00000357412 MEIS2O14770 477 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 GTPBP6O43824 516 aaPredicted RBP11.81□□□□□ -0.52
LINC01560-201ENST00000357412 STAM2O75886 525 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 DDAH1O94760 285 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 LGALS2P05162 132 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 BMP1P13497 986 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 SMARCA1P28370 1054 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 TFF2Q03403 129 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 GRB10Q13322 594 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 NEDD9Q14511 834 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 GNPTABQ3T906 1256 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 USP17L6PQ6QN14 398 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 METTL7BQ6UX53 244 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 ZNF654Q8IZM8 581 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 UHRF1Q96T88 793 aaPredicted RBP11.81□□□□□ -0.52
LINC01560-201ENST00000357412 GPR20Q99678 358 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 MTA3Q9BTC8 594 aa11.81□□□□□ -0.52
LINC01560-201ENST00000357412 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms