RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 WHAMMQ8TF30 809 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 CARD10Q9BWT7 1032 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 SUDS3Q9H7L9 328 aaPredicted RBP13.75□□□□□ -0.21
BDNF-202ENST00000356660 SLC40A1Q9NP59 571 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 GGT7Q9UJ14 662 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 ABCC12Q96J65 1359 aa13.75□□□□□ -0.21
BDNF-202ENST00000356660 XRN1Q8IZH2 1706 aaKnown RBP13.75□□□□□ -0.21
BDNF-202ENST00000356660 RGS16O15492 202 aaPredicted RBP13.74□□□□□ -0.21
BDNF-202ENST00000356660 PBX1P40424 430 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 ANKRD42Q8N9B4 389 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 CCDC197Q8NCU1 140 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 LMBR1Q8WVP7 490 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 THOC1Q96FV9 657 aaKnown RBP13.74□□□□□ -0.21
BDNF-202ENST00000356660 MAP3K15Q6ZN16 1313 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 OVOS2A0A0G2JMS6 1433 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 CYP2D6P10635 497 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 SLC8A1P32418 973 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 MYO1EQ12965 1108 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 CALCRLQ16602 461 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 PTGISQ16647 500 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 TTMPQ5BVD1 217 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 WDR59Q6PJI9 974 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 ISCA1Q9BUE6 129 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 TMEM60Q9H2L4 133 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 PCDHA4Q9UN74 947 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.74□□□□□ -0.21
BDNF-202ENST00000356660 SPDYE3A6NKU9 549 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 AGPSO00116 658 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 TRIM68Q6AZZ1 485 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 MYOCDQ8IZQ8 938 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 U2AF1L4Q8WU68 220 aaKnown RBP13.74□□□□□ -0.21
BDNF-202ENST00000356660 CACNA1FO60840 1977 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 DDAH1O94760 285 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 CREG2Q8IUH2 290 aa13.74□□□□□ -0.21
BDNF-202ENST00000356660 PDHBP11177 359 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 ADCY1Q08828 1119 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 MTMR3Q13615 1198 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 ARL6IP4Q66PJ3 421 aaKnown RBP13.73□□□□□ -0.21
BDNF-202ENST00000356660 APTXQ7Z2E3 356 aaKnown RBP13.73□□□□□ -0.21
BDNF-202ENST00000356660 AENQ8WTP8 325 aaKnown RBP13.73□□□□□ -0.21
BDNF-202ENST00000356660 HVCN1Q96D96 273 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 CYFIP2Q96F07 1278 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 ELAC2Q9BQ52 826 aaKnown RBP13.73□□□□□ -0.21
BDNF-202ENST00000356660 ACTR5Q9H9F9 607 aaPredicted RBP13.73□□□□□ -0.21
BDNF-202ENST00000356660 PDS5AQ29RF7 1337 aaKnown RBP13.73□□□□□ -0.21
BDNF-202ENST00000356660 PLTPP55058 493 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 GTF2IP78347 998 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 C3P01024 1663 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 CETN3O15182 167 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 CHMP2AO43633 222 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
BDNF-202ENST00000356660 DENND2CQ68D51 928 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 HOOK3Q86VS8 718 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 TAOK3Q9H2K8 898 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 FBXL5Q9UKA1 691 aa13.73□□□□□ -0.21
BDNF-202ENST00000356660 TTLL12Q14166 644 aaPredicted RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 PDXDC2PQ6P474 469 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 INTS9Q9NV88 658 aaKnown RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 ARHGAP20Q9P2F6 1191 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 KLRF2D3W0D1 207 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 RAD51CO43502 376 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 ZKSCAN8Q15776 578 aaPredicted RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 SEPT7Q16181 437 aaKnown RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 GLE1Q53GS7 698 aaKnown RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 DNAAF5Q86Y56 855 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 MSL3Q8N5Y2 521 aaKnown RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 AMACRQ9UHK6 382 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 LRRC10BA6NIK2 292 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 PPP1R12AO14974 1030 aaPredicted RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 DAPK3O43293 454 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 SEMA3FQ13275 785 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 NEK8Q86SG6 692 aa13.72□□□□□ -0.21
BDNF-202ENST00000356660 REXO1Q8N1G1 1221 aaKnown RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 CCDC97Q96F63 343 aaPredicted RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 NUCKS1Q9H1E3 243 aaKnown RBP13.72□□□□□ -0.21
BDNF-202ENST00000356660 SKAP2O75563 359 aaPredicted RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 FAM107AO95990 144 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 VEGFAP15692 232 aaPredicted RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 PLCG2P16885 1265 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 LACTBP83111 547 aaPredicted RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 CETN1Q12798 172 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 PKN1Q16512 942 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 MFSD14BQ5SR56 506 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 SH3RF1Q7Z6J0 888 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 PRPF38AQ8NAV1 312 aaKnown RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 ERMNQ8TAM6 284 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 MDM1Q8TC05 714 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 DYNLL2Q96FJ2 89 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 TRIM9Q9C026 710 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 TRIM6Q9C030 488 aaPredicted RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 FAM208AQ9UK61 1670 aaKnown RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 PGRMC1O00264 195 aaKnown RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 PFKFB3Q16875 520 aaPredicted RBP13.71□□□□□ -0.21
BDNF-202ENST00000356660 CCDC65Q8IXS2 484 aa13.71□□□□□ -0.21
BDNF-202ENST00000356660 STAG2Q8N3U4 1231 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms