RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 DEFB103AP81534 67 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 ZNF200P98182 395 aaPredicted RBP18.44■□□□□ 0.54
PDGFA-201ENST00000354513 COL9A3Q14050 684 aaPredicted RBP18.44■□□□□ 0.54
PDGFA-201ENST00000354513 MBTPS1Q14703 1052 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 MFSD10Q14728 455 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 HSDL1Q3SXM5 330 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 MYSM1Q5VVJ2 828 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 KRT40Q6A162 431 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 LRRC8DQ7L1W4 858 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 VSIG10LQ86VR7 867 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 HOMER1Q86YM7 354 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 PHOSPHO2Q8TCD6 241 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 ASB2Q96Q27 587 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 ALG1Q9BT22 464 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 FTOQ9C0B1 505 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDGFA-201ENST00000354513 NOD1Q9Y239 953 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 PCDHA1Q9Y5I3 950 aa18.44■□□□□ 0.54
PDGFA-201ENST00000354513 LCHNA4D1U4 455 aa18.43■□□□□ 0.54
PDGFA-201ENST00000354513 E7EWF7 191 aa18.43■□□□□ 0.54
PDGFA-201ENST00000354513 BAIAP3O94812 1187 aa18.43■□□□□ 0.54
PDGFA-201ENST00000354513 CKBP12277 381 aa18.43■□□□□ 0.54
PDGFA-201ENST00000354513 SELPP16109 830 aa18.43■□□□□ 0.54
PDGFA-201ENST00000354513 POU3F3P20264 500 aaPredicted RBP18.43■□□□□ 0.54
PDGFA-201ENST00000354513 UBA1P22314 1058 aaKnown RBP18.43■□□□□ 0.54
PDGFA-201ENST00000354513 LAMC2Q13753 1193 aa18.43■□□□□ 0.54
PDGFA-201ENST00000354513 KIAA0753Q2KHM9 967 aa18.43■□□□□ 0.54
PDGFA-201ENST00000354513 MAP3K20Q9NYL2 800 aaKnown RBP18.43■□□□□ 0.54
PDGFA-201ENST00000354513 MTCH2Q9Y6C9 303 aa18.43■□□□□ 0.54
PDGFA-201ENST00000354513 IFIT3O14879 490 aaKnown RBP18.42■□□□□ 0.54
PDGFA-201ENST00000354513 SGSM2O43147 1006 aa18.42■□□□□ 0.54
PDGFA-201ENST00000354513 GGPS1O95749 300 aa18.42■□□□□ 0.54
PDGFA-201ENST00000354513 CELF3Q5SZQ8 465 aaKnown RBP18.42■□□□□ 0.54
PDGFA-201ENST00000354513 DHX37Q8IY37 1157 aaKnown RBP18.42■□□□□ 0.54
PDGFA-201ENST00000354513 MB21D2Q8IYB1 491 aaPredicted RBP18.42■□□□□ 0.54
PDGFA-201ENST00000354513 CCDC155Q8N6L0 562 aa18.42■□□□□ 0.54
PDGFA-201ENST00000354513 C16orf70Q9BSU1 422 aa18.42■□□□□ 0.54
PDGFA-201ENST00000354513 RALGAPA2Q2PPJ7 1873 aa18.41■□□□□ 0.54
PDGFA-201ENST00000354513 TNFRSF10AO00220 468 aa18.41■□□□□ 0.54
PDGFA-201ENST00000354513 LPXNO60711 386 aa18.41■□□□□ 0.54
PDGFA-201ENST00000354513 MRPS9P82933 396 aaKnown RBP18.41■□□□□ 0.54
PDGFA-201ENST00000354513 SEMA3FQ13275 785 aa18.41■□□□□ 0.54
PDGFA-201ENST00000354513 MKRN4PQ13434 485 aaPredicted RBP18.41■□□□□ 0.54
PDGFA-201ENST00000354513 MICALL1Q8N3F8 863 aa18.41■□□□□ 0.54
PDGFA-201ENST00000354513 KATNAL1Q9BW62 490 aa18.41■□□□□ 0.54
PDGFA-201ENST00000354513 TELO2Q9Y4R8 837 aa18.41■□□□□ 0.54
PDGFA-201ENST00000354513 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
PDGFA-201ENST00000354513 HOXC8P31273 242 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 MRPS5P82675 430 aaKnown RBP18.4■□□□□ 0.54
PDGFA-201ENST00000354513 TFF2Q03403 129 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 PTK7Q13308 1070 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 WTAPQ15007 396 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 ZNF618Q5T7W0 954 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 CNKSR3Q6P9H4 555 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 SAMD3Q8N6K7 520 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 C7orf31Q8N865 590 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 IGDCC4Q8TDY8 1250 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 ADAMTS19Q8TE59 1207 aa18.4■□□□□ 0.54
PDGFA-201ENST00000354513 KAT6AQ92794 2004 aa18.39■□□□□ 0.54
PDGFA-201ENST00000354513 LOXHD1Q8IVV2 1947 aa18.39■□□□□ 0.54
PDGFA-201ENST00000354513 PNMA6FA0A0J9YX94 578 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 GCOM1H8Y6P7 765 aaPredicted RBP18.39■□□□□ 0.53
PDGFA-201ENST00000354513 POLR2MP0CAP2 368 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 CCND2P30279 289 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 IRX6P78412 446 aaPredicted RBP18.39■□□□□ 0.53
PDGFA-201ENST00000354513 TRDNQ13061 729 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 FCHSD1Q86WN1 690 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 NCOA7Q8NI08 942 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 ARNTL2Q8WYA1 636 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 MAP4K1Q92918 833 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 SPATA33Q96N06 139 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 OSBPL7Q9BZF2 842 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 LY9Q9HBG7 655 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 COL4A6Q14031 1691 aa18.39■□□□□ 0.53
PDGFA-201ENST00000354513 BDP1A6H8Y1 2624 aa18.38■□□□□ 0.53
PDGFA-201ENST00000354513 KIAA1671Q9BY89 1806 aa18.38■□□□□ 0.53
PDGFA-201ENST00000354513 PPFIA4O75335 1185 aa18.38■□□□□ 0.53
PDGFA-201ENST00000354513 GRB10Q13322 594 aa18.38■□□□□ 0.53
PDGFA-201ENST00000354513 KCNV1Q6PIU1 500 aa18.38■□□□□ 0.53
PDGFA-201ENST00000354513 RUFY2Q8WXA3 655 aa18.38■□□□□ 0.53
PDGFA-201ENST00000354513 MYL10Q9BUA6 226 aa18.38■□□□□ 0.53
PDGFA-201ENST00000354513 TLL1O43897 1013 aa18.37■□□□□ 0.53
PDGFA-201ENST00000354513 BMP1P13497 986 aa18.37■□□□□ 0.53
PDGFA-201ENST00000354513 ICAM3P32942 547 aa18.37■□□□□ 0.53
PDGFA-201ENST00000354513 KCNJ6P48051 423 aa18.37■□□□□ 0.53
PDGFA-201ENST00000354513 RALYLQ86SE5 291 aaKnown RBP18.37■□□□□ 0.53
PDGFA-201ENST00000354513 SERINC5Q86VE9 423 aa18.37■□□□□ 0.53
PDGFA-201ENST00000354513 PIBF1Q8WXW3 757 aa18.37■□□□□ 0.53
PDGFA-201ENST00000354513 NECAB3Q96P71 396 aaPredicted RBP18.37■□□□□ 0.53
PDGFA-201ENST00000354513 INPP4AQ96PE3 977 aaPredicted RBP18.37■□□□□ 0.53
PDGFA-201ENST00000354513 RBM8AQ9Y5S9 174 aaKnown RBP18.37■□□□□ 0.53
PDGFA-201ENST00000354513 GJB5O95377 273 aa18.36■□□□□ 0.53
PDGFA-201ENST00000354513 PARNO95453 639 aaKnown RBP18.36■□□□□ 0.53
PDGFA-201ENST00000354513 LGALS2P05162 132 aa18.36■□□□□ 0.53
PDGFA-201ENST00000354513 TGFB3P10600 412 aa18.36■□□□□ 0.53
PDGFA-201ENST00000354513 KCNQ1P51787 676 aa18.36■□□□□ 0.53
PDGFA-201ENST00000354513 ZNF654Q8IZM8 581 aa18.36■□□□□ 0.53
PDGFA-201ENST00000354513 UHRF1Q96T88 793 aaPredicted RBP18.36■□□□□ 0.53
PDGFA-201ENST00000354513 SPZ1Q9BXG8 430 aa18.36■□□□□ 0.53
PDGFA-201ENST00000354513 ABHD14A-ACY1A0A1B0GW23 586 aa18.35■□□□□ 0.53
PDGFA-201ENST00000354513 ERICH2A1L162 156 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms