RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 DGKDQ16760 1214 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 RPUSD2Q8IZ73 545 aaKnown RBP13.75□□□□□ -0.21
TUBD1-203ENST00000346141 HERVK_113Q902F9 699 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 MYL10Q9BUA6 226 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 TTYH1Q9H313 450 aaPredicted RBP13.75□□□□□ -0.21
TUBD1-203ENST00000346141 SEC63Q9UGP8 760 aaKnown RBP13.75□□□□□ -0.21
TUBD1-203ENST00000346141 KIAA1217Q5T5P2 1943 aa13.75□□□□□ -0.21
TUBD1-203ENST00000346141 RGS20O76081 388 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 PFKMP08237 780 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 TGFB3P10600 412 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 CYP2C9P11712 490 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 DNAJB2P25686 324 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 CCND2P30279 289 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 PPTC7Q8NI37 304 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 CDX2Q99626 313 aaPredicted RBP13.74□□□□□ -0.21
TUBD1-203ENST00000346141 NOD1Q9Y239 953 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 SLC12A7Q9Y666 1083 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 SESTD1Q86VW0 696 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 FCHSD1Q86WN1 690 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 DHX37Q8IY37 1157 aaKnown RBP13.74□□□□□ -0.21
TUBD1-203ENST00000346141 IL31RAQ8NI17 732 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 PIBF1Q8WXW3 757 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 KATNAL1Q9BW62 490 aa13.74□□□□□ -0.21
TUBD1-203ENST00000346141 CDH23Q9H251 3354 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 CDC45O75419 566 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 STAM2O75886 525 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 RFC2P35250 354 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 BFSP2Q13515 415 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 GNPTABQ3T906 1256 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 SGMS1Q86VZ5 419 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 KAT2BQ92831 832 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 CUL5Q93034 780 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 TIFAQ96CG3 184 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 SCLYQ96I15 445 aa13.73□□□□□ -0.21
TUBD1-203ENST00000346141 PIK3CDO00329 1044 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 PPFIA4O75335 1185 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 PLEKHA8P1O95397 391 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 GGPS1O95749 300 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 F2P00734 622 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 HOXD8P13378 290 aaPredicted RBP13.72□□□□□ -0.21
TUBD1-203ENST00000346141 UBA1P22314 1058 aaKnown RBP13.72□□□□□ -0.21
TUBD1-203ENST00000346141 CHMP4BP1P59074 171 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 RAB30Q15771 203 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 PTGISQ16647 500 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 CELF3Q5SZQ8 465 aaKnown RBP13.72□□□□□ -0.21
TUBD1-203ENST00000346141 MYSM1Q5VVJ2 828 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 SRBD1Q8N5C6 995 aaKnown RBP13.72□□□□□ -0.21
TUBD1-203ENST00000346141 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 SMARCC2Q8TAQ2 1214 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 CAGE1Q8TC20 777 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 SPATA33Q96N06 139 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 PBX4Q9BYU1 374 aa13.72□□□□□ -0.21
TUBD1-203ENST00000346141 CXXC1Q9P0U4 656 aaPredicted RBP13.72□□□□□ -0.21
TUBD1-203ENST00000346141 RXRAP19793 462 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 COL9A3Q14050 684 aaPredicted RBP13.71□□□□□ -0.21
TUBD1-203ENST00000346141 TSGA10IPQ3SY00 556 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 XRRA1Q6P2D8 792 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 C7orf31Q8N865 590 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 FANCBQ8NB91 859 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 PPP1R13LQ8WUF5 828 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 INPP4AQ96PE3 977 aaPredicted RBP13.71□□□□□ -0.21
TUBD1-203ENST00000346141 NEK1Q96PY6 1258 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 GTF2IRD1Q9UHL9 959 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 MSRAQ9UJ68 235 aa13.71□□□□□ -0.21
TUBD1-203ENST00000346141 CHD9Q3L8U1 2897 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 GRXCR1A8MXD5 290 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 HAS3O00219 553 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 IQCF3P0C7M6 154 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 ZNF286BP0CG31 522 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 ACTN1P12814 892 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 ICAM3P32942 547 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 PSEN2P49810 448 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 SP2Q02086 613 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 KRT32Q14532 448 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 MFSD10Q14728 455 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 HSDL1Q3SXM5 330 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 GDF6Q6KF10 455 aaPredicted RBP13.7□□□□□ -0.22
TUBD1-203ENST00000346141 USP17L6PQ6QN14 398 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 TMTC3Q6ZXV5 915 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 MICU3Q86XE3 530 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 MYLIPQ8WY64 445 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 VWCEQ96DN2 955 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 CCDC136Q96JN2 1154 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 LRRC2Q9BYS8 371 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 MLXIPQ9HAP2 919 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 SLC4A7Q9Y6M7 1214 aa13.7□□□□□ -0.22
TUBD1-203ENST00000346141 ZBBXA8MT70 800 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 MEIS2O14770 477 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 FIBPO43427 364 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 FOSL2P15408 326 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 PBX2P40425 430 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 MRPS9P82933 396 aaKnown RBP13.69□□□□□ -0.22
TUBD1-203ENST00000346141 RBL2Q08999 1139 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms