RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PRUNE2Q8WUY3 3088 aa14.36□□□□□ -0.11
SGCA-202ENST00000344627 OPLAHO14841 1288 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 SLC27A2O14975 620 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 CYTH3O43739 400 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 SORBS3O60504 671 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 STAM2O75886 525 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 CCND2P30279 289 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 KIF5BP33176 963 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 PTK7Q13308 1070 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 CREB3L3Q68CJ9 461 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 CNKSR3Q6P9H4 555 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 DHX37Q8IY37 1157 aaKnown RBP14.35□□□□□ -0.11
SGCA-202ENST00000344627 TMTC2Q8N394 836 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 PPM1EQ8WY54 764 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 RRP36Q96EU6 259 aaKnown RBP14.35□□□□□ -0.11
SGCA-202ENST00000344627 UHRF1Q96T88 793 aaPredicted RBP14.35□□□□□ -0.11
SGCA-202ENST00000344627 LY9Q9HBG7 655 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 DDX41Q9UJV9 622 aaKnown RBP14.35□□□□□ -0.11
SGCA-202ENST00000344627 EMSYQ7Z589 1322 aa14.35□□□□□ -0.11
SGCA-202ENST00000344627 TRIP12Q14669 1992 aaPredicted RBP14.34□□□□□ -0.11
SGCA-202ENST00000344627 SCN10AQ9Y5Y9 1956 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 DDAH1O94760 285 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 F2P00734 622 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 CXCL10P02778 98 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 CA3P07451 260 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 HOXD8P13378 290 aaPredicted RBP14.34□□□□□ -0.11
SGCA-202ENST00000344627 RABGGTBP53611 331 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 SLC35G1Q2M3R5 365 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 LRRC8DQ7L1W4 858 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 ADAMTS19Q8TE59 1207 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 ZFP91Q96JP5 570 aaPredicted RBP14.34□□□□□ -0.11
SGCA-202ENST00000344627 PDCD2LQ9BRP1 358 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 LRRC2Q9BYS8 371 aa14.34□□□□□ -0.11
SGCA-202ENST00000344627 SEC63Q9UGP8 760 aaKnown RBP14.34□□□□□ -0.11
SGCA-202ENST00000344627 TLL1O43897 1013 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 CAND2O75155 1236 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 RXRAP19793 462 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 GNAQP50148 359 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 IKBKEQ14164 716 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 PGM5Q15124 567 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 RNF20Q5VTR2 975 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 RAB11FIP4Q86YS3 637 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 CUL5Q93034 780 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 TMEM87BQ96K49 555 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 ALG1Q9BT22 464 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 SLC12A7Q9Y666 1083 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 MTCH2Q9Y6C9 303 aa14.33□□□□□ -0.12
SGCA-202ENST00000344627 SCN5AQ14524 2016 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 HAS3O00219 553 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 SH2B2O14492 632 aaPredicted RBP14.32□□□□□ -0.12
SGCA-202ENST00000344627 PSEN2P49810 448 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 CCDC85BQ15834 202 aaPredicted RBP14.32□□□□□ -0.12
SGCA-202ENST00000344627 GNPTABQ3T906 1256 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 BMP2KLQ5H9B9 411 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 GDF6Q6KF10 455 aaPredicted RBP14.32□□□□□ -0.12
SGCA-202ENST00000344627 SYNE3Q6ZMZ3 975 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 VSIG10LQ86VR7 867 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 CMTR1Q8N1G2 835 aaKnown RBP14.32□□□□□ -0.12
SGCA-202ENST00000344627 CCDC82Q8N4S0 544 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 IL31RAQ8NI17 732 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 SMARCC2Q8TAQ2 1214 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 KAT2BQ92831 832 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 MAP3K14Q99558 947 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 RAD9AQ99638 391 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 LZTS2Q9BRK4 669 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 C1QTNF1Q9BXJ1 281 aa14.32□□□□□ -0.12
SGCA-202ENST00000344627 MUC3AQ02505 3323 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 PLEKHA8P1O95397 391 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 GGPS1O95749 300 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 ZNF286BP0CG31 522 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 CALM1P0DP23 149 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 CALM2P0DP24 149 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 CALM3P0DP25 149 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 GNAT1P11488 350 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 CKBP12277 381 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 WDR5P61964 334 aaKnown RBP14.31□□□□□ -0.12
SGCA-202ENST00000344627 TAP1Q03518 808 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 MFSD10Q14728 455 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 NECTIN1Q15223 517 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 CELF3Q5SZQ8 465 aaKnown RBP14.31□□□□□ -0.12
SGCA-202ENST00000344627 MYSM1Q5VVJ2 828 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 CCDC136Q96JN2 1154 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 SPATA33Q96N06 139 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 MTA3Q9BTC8 594 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 ZBED2Q9BTP6 218 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 MLXIPQ9HAP2 919 aa14.31□□□□□ -0.12
SGCA-202ENST00000344627 GJB5O95377 273 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 BMP1P13497 986 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 MYOGP15173 224 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 SMARCA1P28370 1054 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 SKIV2LQ15477 1246 aaKnown RBP14.3□□□□□ -0.12
SGCA-202ENST00000344627 KIAA0753Q2KHM9 967 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 XRRA1Q6P2D8 792 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 MICU3Q86XE3 530 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 SRBD1Q8N5C6 995 aaKnown RBP14.3□□□□□ -0.12
SGCA-202ENST00000344627 SAMD11Q96NU1 681 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 USP26Q9BXU7 913 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 RTEL1Q9NZ71 1219 aa14.3□□□□□ -0.12
SGCA-202ENST00000344627 HDAC6Q9UBN7 1215 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms