RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 DPF2Q92785 391 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 CCT8L2Q96SF2 557 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 ROBO2Q9HCK4 1378 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 KCNA6P17658 529 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 MKRN3Q13064 507 aaKnown RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 KCNB1Q14721 858 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 CASQ2O14958 399 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 ATF2P15336 505 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 BYSLQ13895 437 aaKnown RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 DHX34Q14147 1143 aaKnown RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 SLC17A8Q8NDX2 589 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 LIMA1Q9UHB6 759 aaKnown RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 COBLO75128 1261 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 KRT14P02533 472 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PRLRP16471 622 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 RFC4P35249 363 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 HDAC6Q9UBN7 1215 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 SALL3Q9BXA9 1300 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 CPDO75976 1380 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 FOXP2O15409 715 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 FAM107AO95990 144 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 MAGOHP61326 146 aaKnown RBP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PALM2Q8IXS6 379 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 SERPINA10Q9UK55 444 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 MON2Q7Z3U7 1717 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 TMEM131LA2VDJ0 1609 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 STXBP3O00186 592 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 GJC1P36383 396 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 DHX9Q08211 1270 aaKnown RBP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 TRIM11Q96F44 468 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 FAM81BQ96LP2 452 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 CARD10Q9BWT7 1032 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 STOML1Q9UBI4 398 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 USP31Q70CQ4 1352 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 KIF28PB7ZC32 967 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 HNRNPCL1O60812 293 aaKnown RBP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 GYPCP04921 128 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 ELF1P32519 619 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 LRIG3Q6UXM1 1119 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 RPUSD2Q8IZ73 545 aaKnown RBP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 ELAC2Q9BQ52 826 aaKnown RBP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 IRX2Q9BZI1 471 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 GJB4Q9NTQ9 266 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 FBXO2Q9UK22 296 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 OVOS2A0A0J9YW53 1432 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 OVOS2Q6IE36 1432 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PLEKHG2Q9H7P9 1386 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 RASGRF2O14827 1237 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PLCG1P19174 1290 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 CYP27A1Q02318 531 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PPARDQ03181 441 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 DPYDQ12882 1025 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 TCHPQ9BT92 498 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 UTYO14607 1347 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 TEX33O43247 280 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 ECEL1O95672 775 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PRR29P0C7W0 189 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 CAV1Q03135 178 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 RBM26Q5T8P6 1007 aaKnown RBP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 TPX2Q9ULW0 747 aaKnown RBP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 ZRANB2O95218 330 aaKnown RBP eCLIP5.2□□□□□ -1.58
CSMD3-203ENST00000343508 ARHGAP44Q17R89 818 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 SGO2Q562F6 1265 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 NFRKBQ6P4R8 1299 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 WDR17Q8IZU2 1322 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PPFIA2O75334 1257 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PMS2P54278 862 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 SESN3P58005 492 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 FAM47AQ5JRC9 791 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PPP4R1Q8TF05 950 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 RSAD2Q8WXG1 361 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 USP40Q9NVE5 1235 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 MAP3K7O43318 606 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 GGPS1O95749 300 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PSMC4P43686 418 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PPP1R2P3Q6NXS1 205 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 PSTPIP2Q9H939 334 aa5.2□□□□□ -1.58
CSMD3-203ENST00000343508 GOLGA8QA0A0J9YX86 632 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GOLGA8OA6NCC3 632 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 LRRC53A6NM62 1247 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 GOLGA8NF8WBI6 632 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 PFDN1O60925 122 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 AGBL2Q5U5Z8 902 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 UNC13DQ70J99 1090 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 CYB5R4Q7L1T6 521 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 FBXL16Q8N461 479 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 LRRC1Q9BTT6 524 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 VPS37BQ9H9H4 285 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 ANGPTL2Q9UKU9 493 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 PDE6BP35913 854 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 SF3A3Q12874 501 aaKnown RBP eCLIP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 TBC1D1Q86TI0 1168 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-203ENST00000343508 TRIM42Q8IWZ5 723 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 SLITRK6Q9H5Y7 841 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 ADAMTS1Q9UHI8 967 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 PPP1R9AQ9ULJ8 1098 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 RABGAP1Q9Y3P9 1069 aa5.19□□□□□ -1.58
CSMD3-203ENST00000343508 ARHGEF35A5YM69 484 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms