RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RASGRF1Q13972 1273 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 NAA25Q14CX7 972 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 DSTYKQ6XUX3 929 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 TSC1Q92574 1164 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 ZNF653Q96CK0 615 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 CHMP6Q96FZ7 201 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 HOMER3Q9NSC5 361 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 MYO3BQ8WXR4 1341 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 HEXIM1O94992 359 aaKnown RBP16.31■□□□□ 0.2
UBE3B-202ENST00000342494 SLC4A1P02730 911 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 ADCK5Q3MIX3 580 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 RNF139Q8WU17 664 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 DHTKD1Q96HY7 919 aaPredicted RBP16.31■□□□□ 0.2
UBE3B-202ENST00000342494 SLITRK6Q9H5Y7 841 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 ANGPTL3Q9Y5C1 460 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 TTC36A6NLP5 189 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 SH2D4BQ5SQS7 431 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 ARMCX2Q7L311 632 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 FTOQ9C0B1 505 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBE3B-202ENST00000342494 TMEM63CQ9P1W3 806 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 PASKQ96RG2 1323 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 PNMA6FA0A0J9YX94 578 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 PPP6R2O75170 966 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 FAM71BQ8TC56 605 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 PLEKHF1Q96S99 279 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 RPF1Q9H9Y2 349 aaKnown RBP16.3■□□□□ 0.2
UBE3B-202ENST00000342494 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.3■□□□□ 0.2
UBE3B-202ENST00000342494 ATP7BP35670 1465 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 SGK1O00141 431 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 MAPK4P31152 587 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 CACNB3P54284 484 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 ANKRD13CQ8N6S4 541 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 PARVGQ9HBI0 331 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 CARMIL3Q8ND23 1372 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 CRKP46108 304 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 LMNB2Q03252 620 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 NAA35Q5VZE5 725 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 P2RX5Q93086 422 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 LRRN2O75325 713 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 PDE1BQ01064 536 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 SURF1Q15526 300 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 CATSPER4Q7RTX7 472 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 MYLK4Q86YV6 388 aaPredicted RBP16.3■□□□□ 0.2
UBE3B-202ENST00000342494 TTLL11Q8NHH1 800 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 PCDHA5Q9Y5H7 936 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 A0A1W2PQ27 194 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 A0A1W2PQ64 194 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 A0A1W2PQD8 194 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 COBLO75128 1261 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 PPFIA4O75335 1185 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 C10orf67Q8IYJ2 551 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 TTC1Q99614 292 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 SMYD2Q9NRG4 433 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 RNF181Q9P0P0 153 aa16.3■□□□□ 0.2
UBE3B-202ENST00000342494 KDM5DQ9BY66 1539 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 ATXN8OSP0DMR3 200 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 ACTN1P12814 892 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 SNAP25P60880 206 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 PPP1R2P3Q6NXS1 205 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 MCUQ8NE86 351 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 WRNIP1Q96S55 665 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.29■□□□□ 0.2
UBE3B-202ENST00000342494 FBXO40Q9UH90 709 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 GTF2A1P52655 376 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-202ENST00000342494 FKBP3Q00688 224 aaKnown RBP16.29■□□□□ 0.2
UBE3B-202ENST00000342494 RASSF7Q02833 373 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-202ENST00000342494 DCLK2Q8N568 766 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 UBN1Q9NPG3 1134 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 HOXC10Q9NYD6 342 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 RGS12O14924 1447 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 EIF3CLB5ME19 914 aaKnown RBP16.29■□□□□ 0.2
UBE3B-202ENST00000342494 PTPN12Q05209 780 aaKnown RBP16.29■□□□□ 0.2
UBE3B-202ENST00000342494 EHHADHQ08426 723 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 OR6B2Q6IFH4 312 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 EIF3CQ99613 913 aaKnown RBP16.29■□□□□ 0.2
UBE3B-202ENST00000342494 POLIQ9UNA4 740 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 PPP2R2CQ9Y2T4 447 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 EPN1Q9Y6I3 576 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-202ENST00000342494 SH2B2O14492 632 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-202ENST00000342494 GNAT1P11488 350 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 KRT3P12035 628 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 JADE1Q6IE81 842 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 GANCQ8TET4 914 aa16.29■□□□□ 0.2
UBE3B-202ENST00000342494 K7ERI5 159 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 SASH1O94885 1247 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 CD58P19256 250 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 INPP5BP32019 993 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 DDIT3P35638 169 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 DNAJC24Q6P3W2 148 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 RAPH1Q70E73 1250 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 UHMK1Q8TAS1 419 aaKnown RBP16.28■□□□□ 0.2
UBE3B-202ENST00000342494 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.28■□□□□ 0.22e-12■■■■■ 49
UBE3B-202ENST00000342494 NCAPGQ9BPX3 1015 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 BAG5Q9UL15 447 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 WDR64B1ANS9 1081 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms