RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 NLRX1Q86UT6 975 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 GPRASP2Q96D09 838 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 DOCK5Q9H7D0 1870 aa19.05■□□□□ 0.64
SFN-201ENST00000339276 KIF28PB7ZC32 967 aa19.04■□□□□ 0.64
SFN-201ENST00000339276 NKRFO15226 690 aaKnown RBP eCLIP19.04■□□□□ 0.64
SFN-201ENST00000339276 DYNC1LI2O43237 492 aaPredicted RBP19.04■□□□□ 0.64
SFN-201ENST00000339276 SORBS3O60504 671 aa19.04■□□□□ 0.64
SFN-201ENST00000339276 UBA1P22314 1058 aaKnown RBP19.04■□□□□ 0.64
SFN-201ENST00000339276 MTMR1Q13613 665 aa19.04■□□□□ 0.64
SFN-201ENST00000339276 LARP1BQ659C4 914 aaKnown RBP19.04■□□□□ 0.64
SFN-201ENST00000339276 KCNV1Q6PIU1 500 aa19.04■□□□□ 0.64
SFN-201ENST00000339276 UPF3AQ9H1J1 476 aaKnown RBP19.04■□□□□ 0.64
SFN-201ENST00000339276 IGLV3-22A0A075B6J6 115 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 MEIS1O00470 390 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 CTAGE5O15320 804 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 HSP90AA1P07900 732 aaKnown RBP19.03■□□□□ 0.64
SFN-201ENST00000339276 C6orf222P0C671 652 aaPredicted RBP19.03■□□□□ 0.64
SFN-201ENST00000339276 CIITAP33076 1130 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 MNX1P50219 401 aaPredicted RBP19.03■□□□□ 0.64
SFN-201ENST00000339276 GJA9P57773 515 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 ARHGAP1Q07960 439 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 LRRC41Q15345 812 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 SPRYD3Q8NCJ5 442 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 OR6J1Q8NGC5 347 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 AP5M1Q9H0R1 490 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 FOXP1Q9H334 677 aaPredicted RBP19.03■□□□□ 0.64
SFN-201ENST00000339276 BCAS3Q9H6U6 928 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 KCNH7Q9NS40 1196 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 PKD2L1Q9P0L9 805 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 Q9Y3F1 56 aa19.03■□□□□ 0.64
SFN-201ENST00000339276 H3BQV1 296 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 ATP9AO75110 1047 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 CAPN15O75808 1086 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 TDP2O95551 362 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 GH1P01241 217 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 ARP10275 920 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 TGFB3P10600 412 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 USP11P51784 963 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 BEX3Q00994 111 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 GNL2Q13823 731 aaKnown RBP19.02■□□□□ 0.64
SFN-201ENST00000339276 LETM2Q2VYF4 491 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 IFFO2Q5TF58 517 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 NEK8Q86SG6 692 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 PLA2G4DQ86XP0 818 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 DIS3LQ8TF46 1054 aaKnown RBP19.02■□□□□ 0.64
SFN-201ENST00000339276 CDHR1Q96JP9 859 aa19.02■□□□□ 0.64
SFN-201ENST00000339276 GGPS1O95749 300 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 KCNA2P16389 499 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 PRR16Q569H4 304 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 CELF3Q5SZQ8 465 aaKnown RBP19.01■□□□□ 0.63
SFN-201ENST00000339276 NIPA1Q7RTP0 329 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 RNF180Q86T96 592 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 DHX37Q8IY37 1157 aaKnown RBP19.01■□□□□ 0.63
SFN-201ENST00000339276 ARRDC4Q8NCT1 418 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 KLHDC9Q8NEP7 349 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 LENG9Q96B70 501 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 UIMC1Q96RL1 719 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 SPC25Q9HBM1 224 aa19.01■□□□□ 0.63
SFN-201ENST00000339276 DNM1LO00429 736 aa19■□□□□ 0.63
SFN-201ENST00000339276 FARP2O94887 1054 aaPredicted RBP19■□□□□ 0.63
SFN-201ENST00000339276 U2AF2P26368 475 aaKnown RBP eCLIP19■□□□□ 0.63
SFN-201ENST00000339276 CST5P28325 142 aaPredicted RBP19■□□□□ 0.63
SFN-201ENST00000339276 NKX3-2P78367 333 aa19■□□□□ 0.63
SFN-201ENST00000339276 SETQ01105 290 aaPredicted RBP19■□□□□ 0.63
SFN-201ENST00000339276 FSCN1Q16658 493 aaKnown RBP19■□□□□ 0.63
SFN-201ENST00000339276 MCTP1Q6DN14 999 aa19■□□□□ 0.63
SFN-201ENST00000339276 NOSTRINQ8IVI9 506 aa19■□□□□ 0.63
SFN-201ENST00000339276 ANKLE1Q8NAG6 615 aa19■□□□□ 0.63
SFN-201ENST00000339276 AGO4Q9HCK5 861 aaKnown RBP19■□□□□ 0.63
SFN-201ENST00000339276 CYP3A7-CYP3A51PA0A087WV96 503 aa19■□□□□ 0.63
SFN-201ENST00000339276 VPS37CA5D8V6 355 aaPredicted RBP19■□□□□ 0.63
SFN-201ENST00000339276 KBTBD13C9JR72 458 aa19■□□□□ 0.63
SFN-201ENST00000339276 WNT7AO00755 349 aa19■□□□□ 0.63
SFN-201ENST00000339276 MAFGO15525 162 aa19■□□□□ 0.63
SFN-201ENST00000339276 CAPN2P17655 700 aa19■□□□□ 0.63
SFN-201ENST00000339276 PDCP20941 246 aa19■□□□□ 0.63
SFN-201ENST00000339276 SYT1P21579 422 aa19■□□□□ 0.63
SFN-201ENST00000339276 CYP3A7P24462 503 aa19■□□□□ 0.63
SFN-201ENST00000339276 ITGB3BPQ13352 177 aaPredicted RBP19■□□□□ 0.63
SFN-201ENST00000339276 LAMC2Q13753 1193 aa19■□□□□ 0.63
SFN-201ENST00000339276 BECN1Q14457 450 aa19■□□□□ 0.63
SFN-201ENST00000339276 NEDD9Q14511 834 aa19■□□□□ 0.63
SFN-201ENST00000339276 GNASQ5JWF2 1037 aa19■□□□□ 0.63
SFN-201ENST00000339276 MYSM1Q5VVJ2 828 aa19■□□□□ 0.63
SFN-201ENST00000339276 CCSAPQ6IQ19 270 aaPredicted RBP19■□□□□ 0.63
SFN-201ENST00000339276 MOXD1Q6UVY6 613 aa19■□□□□ 0.63
SFN-201ENST00000339276 CYFIP1Q7L576 1253 aa19■□□□□ 0.63
SFN-201ENST00000339276 AFG1LQ8WV93 481 aa19■□□□□ 0.63
SFN-201ENST00000339276 MBOAT7Q96N66 472 aa19■□□□□ 0.63
SFN-201ENST00000339276 SENP7Q9BQF6 1050 aa19■□□□□ 0.63
SFN-201ENST00000339276 SLC37A4O43826 429 aa18.99■□□□□ 0.63
SFN-201ENST00000339276 CCNT1O60563 726 aaKnown RBP18.99■□□□□ 0.63
SFN-201ENST00000339276 CPT1AP50416 773 aa18.99■□□□□ 0.63
SFN-201ENST00000339276 KCNA10Q16322 511 aa18.99■□□□□ 0.63
SFN-201ENST00000339276 Q4G0T1 1027 aa18.99■□□□□ 0.63
SFN-201ENST00000339276 UBE2Q1Q7Z7E8 422 aa18.99■□□□□ 0.63
SFN-201ENST00000339276 EMID1Q96A84 441 aaPredicted RBP18.99■□□□□ 0.63
SFN-201ENST00000339276 PAWRQ96IZ0 340 aaKnown RBP18.99■□□□□ 0.63
SFN-201ENST00000339276 SPATA33Q96N06 139 aa18.99■□□□□ 0.63
SFN-201ENST00000339276 MLXIPQ9HAP2 919 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms