RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 TTLL4Q14679 1199 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 NTRK3Q16288 839 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 KCNA10Q16322 511 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 CCSAPQ6IQ19 270 aaPredicted RBP11.14□□□□□ -0.63
SYN3-201ENST00000332840 EEPD1Q7L9B9 569 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 TDHQ8IZJ6 230 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 WASF1Q92558 559 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 CUL5Q93034 780 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 FERMT2Q96AC1 680 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 LENG1Q96BZ8 264 aaPredicted RBP11.14□□□□□ -0.63
SYN3-201ENST00000332840 TOX2Q96NM4 488 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 MYL10Q9BUA6 226 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 STXBP5LQ9Y2K9 1186 aa11.14□□□□□ -0.63
SYN3-201ENST00000332840 A0A0U1RQG5 324 aaPredicted RBP11.13□□□□□ -0.63
SYN3-201ENST00000332840 DCDC2CA8MYV0 355 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 hCG_1984214I3L0E3 225 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 DYNC1LI2O43237 492 aaPredicted RBP11.13□□□□□ -0.63
SYN3-201ENST00000332840 ADCY6O43306 1168 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 KPNA6O60684 536 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 PPP1R11O60927 126 aaPredicted RBP11.13□□□□□ -0.63
SYN3-201ENST00000332840 ASGR1P07306 291 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 BMP8BP34820 402 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 CSPP1Q1MSJ5 1256 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 TRIM60Q495X7 471 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 KCNV1Q6PIU1 500 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 TMTC3Q6ZXV5 915 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 ANKRD33Q7Z3H0 272 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 TRIM22Q8IYM9 498 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 ZNF713Q8N859 430 aaPredicted RBP11.13□□□□□ -0.63
SYN3-201ENST00000332840 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
SYN3-201ENST00000332840 VTI1AQ96AJ9 217 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 C8orf76Q96K31 380 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
SYN3-201ENST00000332840 PXMP2Q9NR77 195 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 LMBRD1Q9NUN5 540 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 POLR3EQ9NVU0 708 aa11.13□□□□□ -0.63
SYN3-201ENST00000332840 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.12□□□□□ -0.63
SYN3-201ENST00000332840 OPLAHO14841 1288 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 PRPF40AO75400 957 aaKnown RBP11.12□□□□□ -0.63
SYN3-201ENST00000332840 STAM2O75886 525 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 NR3C2P08235 984 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 TXNP10599 105 aaKnown RBP11.12□□□□□ -0.63
SYN3-201ENST00000332840 EIF2AK2P19525 551 aaKnown RBP11.12□□□□□ -0.63
SYN3-201ENST00000332840 AKAP17AQ02040 695 aaKnown RBP11.12□□□□□ -0.63
SYN3-201ENST00000332840 RESTQ13127 1097 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 SLC35G1Q2M3R5 365 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 GNPTABQ3T906 1256 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 XRRA1Q6P2D8 792 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
SYN3-201ENST00000332840 FBXO18Q8NFZ0 1043 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 TAAR1Q96RJ0 339 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 PDCD2LQ9BRP1 358 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 ALG1Q9BT22 464 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 SLC26A6Q9BXS9 759 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 PDGFCQ9NRA1 345 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 GBF1Q92538 1859 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 PLXNA1Q9UIW2 1896 aa11.12□□□□□ -0.63
SYN3-201ENST00000332840 TCF20Q9UGU0 1960 aaKnown RBP11.11□□□□□ -0.63
SYN3-201ENST00000332840 MYADML2A6NDP7 307 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 CTAGE5O15320 804 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 TLR3O15455 904 aaKnown RBP11.11□□□□□ -0.63
SYN3-201ENST00000332840 PQBP1O60828 265 aaKnown RBP11.11□□□□□ -0.63
SYN3-201ENST00000332840 PLEKHA8P1O95397 391 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 DEXIO95424 95 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 CLTBP09497 229 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
SYN3-201ENST00000332840 CCND2P30279 289 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 KRT85P78386 507 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 TLE2Q04725 743 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 TRIM29Q14134 588 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 FOXD4L6Q3SYB3 417 aaPredicted RBP11.11□□□□□ -0.63
SYN3-201ENST00000332840 PPP1R18Q6NYC8 613 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 FOXD4L3Q6VB84 417 aaPredicted RBP11.11□□□□□ -0.63
SYN3-201ENST00000332840 FERMT3Q86UX7 667 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 SRBD1Q8N5C6 995 aaKnown RBP11.11□□□□□ -0.63
SYN3-201ENST00000332840 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 OR6J1Q8NGC5 347 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 TBC1D5Q92609 795 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 PHKBQ93100 1093 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
SYN3-201ENST00000332840 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 COL20A1Q9P218 1284 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 MYH6P13533 1939 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 TTC28Q96AY4 2481 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 CDH23Q9H251 3354 aa11.11□□□□□ -0.63
SYN3-201ENST00000332840 A6NJR5 290 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 ARVCFO00192 962 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 PRPF3O43395 683 aaKnown RBP11.1□□□□□ -0.63
SYN3-201ENST00000332840 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 GH1P01241 217 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 TGFB3P10600 412 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 HOXA13P31271 388 aaPredicted RBP11.1□□□□□ -0.63
SYN3-201ENST00000332840 FOSBP53539 338 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 BEX3Q00994 111 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 GUCY1B3Q02153 619 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
SYN3-201ENST00000332840 KLHL40Q2TBA0 621 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 LRIT3Q3SXY7 679 aa11.1□□□□□ -0.63
SYN3-201ENST00000332840 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms