RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 KLHL7Q8IXQ5 586 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 MIGA1Q8NAN2 632 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 LRRC45Q96CN5 670 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 TBC1D31Q96DN5 1066 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 RSRC1Q96IZ7 334 aaKnown RBP14.07□□□□□ -0.16
CCDC60-201ENST00000327554 TMEM60Q9H2L4 133 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 BCCIPQ9P287 314 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC60-201ENST00000327554 PACSIN2Q9UNF0 486 aaPredicted RBP14.07□□□□□ -0.16
CCDC60-201ENST00000327554 NOVA2Q9UNW9 492 aaKnown RBP14.07□□□□□ -0.16
CCDC60-201ENST00000327554 PCDHGC5Q9Y5F6 944 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 NAB2Q15742 525 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 CCDC178Q5BJE1 867 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 CRELD2Q6UXH1 353 aaPredicted RBP14.06□□□□□ -0.16
CCDC60-201ENST00000327554 DTHD1Q6ZMT9 781 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 DDX42Q86XP3 938 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCDC60-201ENST00000327554 NSMCE1Q8WV22 266 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 TRIM9Q9C026 710 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 BAIAP2L1Q9UHR4 511 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 CCT8L1PA6NM43 557 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 TRIM37O94972 964 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 CALM1P0DP23 149 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 CALM2P0DP24 149 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 CALM3P0DP25 149 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 CALRP27797 417 aaKnown RBP14.06□□□□□ -0.16
CCDC60-201ENST00000327554 UBA7P41226 1012 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 ODF2Q5BJF6 829 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 CPLX4Q7Z7G2 160 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 ZNF483Q8TF39 744 aaPredicted RBP14.06□□□□□ -0.16
CCDC60-201ENST00000327554 FBXL5Q9UKA1 691 aa14.06□□□□□ -0.16
CCDC60-201ENST00000327554 LRP5O75197 1615 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 FLT1P17948 1338 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 BUB1BO60566 1050 aaPredicted RBP14.05□□□□□ -0.16
CCDC60-201ENST00000327554 KLRC1P26715 233 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 FLT3P36888 993 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 MAGOHP61326 146 aaKnown RBP14.05□□□□□ -0.16
CCDC60-201ENST00000327554 EHHADHQ08426 723 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 MYO1EQ12965 1108 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 RIPK1Q13546 671 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 PUM3Q15397 648 aaKnown RBP14.05□□□□□ -0.16
CCDC60-201ENST00000327554 PPP1R7Q15435 360 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 PFKFB3Q16875 520 aaPredicted RBP14.05□□□□□ -0.16
CCDC60-201ENST00000327554 CCDC84Q86UT8 332 aaPredicted RBP14.05□□□□□ -0.16
CCDC60-201ENST00000327554 KIAA0895Q8NCT3 520 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 HELBQ8NG08 1087 aaPredicted RBP14.05□□□□□ -0.16
CCDC60-201ENST00000327554 MAGOHBQ96A72 148 aaKnown RBP14.05□□□□□ -0.16
CCDC60-201ENST00000327554 LRRC4CQ9HCJ2 640 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 BATF3Q9NR55 127 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 SLC12A4Q9UP95 1085 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 C15orf41Q9Y2V0 281 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 CCDC88AQ3V6T2 1871 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 ADAMTSL3P82987 1691 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 DDAH1O94760 285 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 CTSWP56202 376 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 MAN2A1Q16706 1144 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 COBLL1Q53SF7 1204 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 CDCA2Q69YH5 1023 aaPredicted RBP14.05□□□□□ -0.16
CCDC60-201ENST00000327554 CENPPQ6IPU0 288 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 SDR42E1Q8WUS8 393 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 HPS3Q969F9 1004 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 KIF13AQ9H1H9 1805 aa14.05□□□□□ -0.16
CCDC60-201ENST00000327554 TLR2O60603 784 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 PLCG1P19174 1290 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 PPP1R2P41236 205 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 ERMARDQ5T6L9 678 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 STAG2Q8N3U4 1231 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 SCFD2Q8WU76 684 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 THOC1Q96FV9 657 aaKnown RBP14.04□□□□□ -0.16
CCDC60-201ENST00000327554 CHMP6Q96FZ7 201 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 XPO6Q96QU8 1125 aaKnown RBP14.04□□□□□ -0.16
CCDC60-201ENST00000327554 C7orf25Q9BPX7 421 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 GSTA1P08263 222 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 ASIC1P78348 528 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 TDRD12Q587J7 1177 aaKnown RBP14.04□□□□□ -0.16
CCDC60-201ENST00000327554 BLIDQ8IZY5 108 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 CCDC197Q8NCU1 140 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 ARMC2Q8NEN0 867 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 LMBR1Q8WVP7 490 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 UBLCP1Q8WVY7 318 aaPredicted RBP14.04□□□□□ -0.16
CCDC60-201ENST00000327554 EDEM3Q9BZQ6 932 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 FAM129AQ9BZQ8 928 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 CUEDC2Q9H467 287 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 MAGEF1Q9HAY2 307 aa14.04□□□□□ -0.16
CCDC60-201ENST00000327554 ABCB11O95342 1321 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 SNAP23O00161 211 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 CES2O00748 559 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 MTMR3Q13615 1198 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 BZW1Q7L1Q6 419 aaKnown RBP14.03□□□□□ -0.16
CCDC60-201ENST00000327554 ADGRA1Q86SQ6 560 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 CCDC63Q8NA47 563 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 MDM1Q8TC05 714 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 RASGRP4Q8TDF6 673 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 CCDC47Q96A33 483 aaKnown RBP14.03□□□□□ -0.16
CCDC60-201ENST00000327554 CENPTQ96BT3 561 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 TLCD1Q96CP7 247 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 ZNF317Q96PQ6 595 aaPredicted RBP14.03□□□□□ -0.16
CCDC60-201ENST00000327554 EME2A4GXA9 379 aaPredicted RBP14.03□□□□□ -0.16
CCDC60-201ENST00000327554 ANP32DO95626 131 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 CSB-PGBD3P0DP91 1061 aa14.03□□□□□ -0.16
CCDC60-201ENST00000327554 GCKP35557 465 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms