RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 ATP8A2Q9NTI2 1148 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPN7-201ENST00000309017 CALCRLQ16602 461 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 FAM83BQ5T0W9 1011 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 CCDC13Q8IYE1 715 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 GOPCQ9HD26 462 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPN7-201ENST00000309017 MYMKA6NI61 221 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 SERPING1P05155 500 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 TMOD1P28289 359 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 ASIC2Q16515 512 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 KRT71Q3SY84 523 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 PARP10Q53GL7 1025 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 BARHL2Q9NY43 387 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.26□□□□□ -0.45
PTPN7-201ENST00000309017 MYH13Q9UKX3 1938 aa12.26□□□□□ -0.45
PTPN7-201ENST00000309017 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
PTPN7-201ENST00000309017 TNS2Q63HR2 1409 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 FSBPO95073 299 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 FAM107AO95990 144 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 PRPHP41219 470 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 PRPF4BQ13523 1007 aaKnown RBP12.25□□□□□ -0.45
PTPN7-201ENST00000309017 E2F5Q15329 346 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 CENPPQ6IPU0 288 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 GALNT17Q6IS24 598 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 RUFY4Q6ZNE9 571 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 MYOCDQ8IZQ8 938 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 CYFIP2Q96F07 1278 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 GDF3Q9NR23 364 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 SAP30BPQ9UHR5 308 aaKnown RBP12.25□□□□□ -0.45
PTPN7-201ENST00000309017 POTEMA6NI47 508 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 HNRNPH3P31942 346 aaKnown RBP12.25□□□□□ -0.45
PTPN7-201ENST00000309017 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 UBE4AQ14139 1066 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 RCSD1Q6JBY9 416 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 UNC13DQ70J99 1090 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 REXO1Q8N1G1 1221 aaKnown RBP12.25□□□□□ -0.45
PTPN7-201ENST00000309017 SLC44A5Q8NCS7 719 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 NSUN4Q96CB9 384 aaKnown RBP12.25□□□□□ -0.45
PTPN7-201ENST00000309017 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
PTPN7-201ENST00000309017 NOVA2Q9UNW9 492 aaKnown RBP12.25□□□□□ -0.45
PTPN7-201ENST00000309017 GLI3P10071 1580 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 SSU72P8A0A1W2PR75 194 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 STXBP3O00186 592 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 TMED8Q6PL24 325 aaPredicted RBP12.25□□□□□ -0.45
PTPN7-201ENST00000309017 CACNA2D3Q8IZS8 1091 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 COL4A3BPQ9Y5P4 624 aa12.25□□□□□ -0.45
PTPN7-201ENST00000309017 GMNCA6NCL1 334 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 SMIM23A6NLE4 172 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 TNNI2P48788 182 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 LRRC63Q05C16 580 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 NEDD9Q14511 834 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 ZNF572Q7Z3I7 529 aaPredicted RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 DGKHQ86XP1 1220 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 DDX12PQ92771 950 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 PACSIN1Q9BY11 444 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 DDX47Q9H0S4 455 aaKnown RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 NUCKS1Q9H1E3 243 aaKnown RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 DPH5Q9H2P9 285 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 BAZ2AQ9UIF9 1905 aaKnown RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 ADAMTS2O95450 1211 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 EZRP15311 586 aaKnown RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 TNFRSF8P28908 595 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 SNCBQ16143 134 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 CDC37Q16543 378 aaPredicted RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 TCERG1LQ5VWI1 586 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 GUF1Q8N442 669 aaKnown RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 BAP1Q92560 729 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 VCPKMTQ9H867 229 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 SLC40A1Q9NP59 571 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 CEP72Q9P209 647 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 ODF2LQ9ULJ1 636 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 TLDC2A0PJX2 215 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 KRIT1O00522 736 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 PJA2O43164 708 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 HIBADHP31937 336 aaKnown RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 FKBP3Q00688 224 aaKnown RBP12.24□□□□□ -0.45
PTPN7-201ENST00000309017 GRM4Q14833 912 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 GLIS3Q8NEA6 775 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 CCDC87Q9NVE4 849 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 ATP6V0A2Q9Y487 856 aa12.24□□□□□ -0.45
PTPN7-201ENST00000309017 A0A087X0T9 212 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 FAM228BP0C875 321 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 HSD17B3P37058 310 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 CACNB1Q02641 598 aaPredicted RBP12.23□□□□□ -0.45
PTPN7-201ENST00000309017 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 USP17L2Q6R6M4 530 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 DNAAF5Q86Y56 855 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 N4BP2L2Q92802 583 aaPredicted RBP12.23□□□□□ -0.45
PTPN7-201ENST00000309017 ACSBG1Q96GR2 724 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 UBA5Q9GZZ9 404 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 TMEM260Q9NX78 707 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 FLT1P17948 1338 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 TIAM2Q8IVF5 1701 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 CYTH3O43739 400 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 NAB2Q15742 525 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 USP38Q8NB14 1042 aa12.23□□□□□ -0.45
PTPN7-201ENST00000309017 SELENOSQ9BQE4 189 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms