RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PRR16Q569H4 304 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 NIPA1Q7RTP0 329 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 PLA2G4DQ86XP0 818 aa27.82■■■□□ 2.04
HOXC9-201ENST00000303450 LENG1Q96BZ8 264 aaPredicted RBP27.82■■■□□ 2.04
HOXC9-201ENST00000303450 NAP1L4Q99733 375 aaKnown RBP27.82■■■□□ 2.04
HOXC9-201ENST00000303450 DDX41Q9UJV9 622 aaKnown RBP27.82■■■□□ 2.04
HOXC9-201ENST00000303450 NKRFO15226 690 aaKnown RBP eCLIP27.81■■■□□ 2.04
HOXC9-201ENST00000303450 CCNT1O60563 726 aaKnown RBP27.81■■■□□ 2.04
HOXC9-201ENST00000303450 DUSP11O75319 330 aaKnown RBP27.81■■■□□ 2.04
HOXC9-201ENST00000303450 GJB1P08034 283 aa27.81■■■□□ 2.04
HOXC9-201ENST00000303450 SETQ01105 290 aaPredicted RBP27.81■■■□□ 2.04
HOXC9-201ENST00000303450 TMEM63BQ5T3F8 832 aa27.81■■■□□ 2.04
HOXC9-201ENST00000303450 MOXD1Q6UVY6 613 aa27.81■■■□□ 2.04
HOXC9-201ENST00000303450 KCNH7Q9NS40 1196 aa27.81■■■□□ 2.04
HOXC9-201ENST00000303450 NOL7Q9UMY1 257 aaKnown RBP27.81■■■□□ 2.04
HOXC9-201ENST00000303450 MTMR6Q9Y217 621 aa27.81■■■□□ 2.04
HOXC9-201ENST00000303450 IGLV3-22A0A075B6J6 115 aa27.8■■■□□ 2.04
HOXC9-201ENST00000303450 CYP3A7-CYP3A51PA0A087WV96 503 aa27.8■■■□□ 2.04
HOXC9-201ENST00000303450 TDP2O95551 362 aa27.8■■■□□ 2.04
HOXC9-201ENST00000303450 ATP2B1P20020 1258 aa27.8■■■□□ 2.04
HOXC9-201ENST00000303450 CYP3A7P24462 503 aa27.8■■■□□ 2.04
HOXC9-201ENST00000303450 SEMA3FQ13275 785 aa27.8■■■□□ 2.04
HOXC9-201ENST00000303450 GJC2Q5T442 439 aaPredicted RBP27.8■■■□□ 2.04
HOXC9-201ENST00000303450 LHX8Q68G74 356 aa27.8■■■□□ 2.04
HOXC9-201ENST00000303450 FERMT3Q86UX7 667 aa27.8■■■□□ 2.04
HOXC9-201ENST00000303450 GNEQ9Y223 722 aaKnown RBP27.8■■■□□ 2.04
HOXC9-201ENST00000303450 ARP10275 920 aa27.79■■■□□ 2.04
HOXC9-201ENST00000303450 GCFC2P16383 781 aaKnown RBP27.79■■■□□ 2.04
HOXC9-201ENST00000303450 PPP4R3AQ6IN85 833 aa27.79■■■□□ 2.04
HOXC9-201ENST00000303450 XPNPEP3Q9NQH7 507 aa27.79■■■□□ 2.04
HOXC9-201ENST00000303450 DDX25Q9UHL0 483 aaKnown RBP27.79■■■□□ 2.04
HOXC9-201ENST00000303450 KIAA0100Q14667 2235 aaKnown RBP27.79■■■□□ 2.04
HOXC9-201ENST00000303450 UBA1P22314 1058 aaKnown RBP27.78■■■□□ 2.04
HOXC9-201ENST00000303450 TLK2Q86UE8 772 aa27.78■■■□□ 2.04
HOXC9-201ENST00000303450 U2AF1L4Q8WU68 220 aaKnown RBP27.78■■■□□ 2.04
HOXC9-201ENST00000303450 COPS5Q92905 334 aa27.78■■■□□ 2.04
HOXC9-201ENST00000303450 AP5M1Q9H0R1 490 aa27.78■■■□□ 2.04
HOXC9-201ENST00000303450 SPC25Q9HBM1 224 aa27.78■■■□□ 2.04
HOXC9-201ENST00000303450 PKD2L1Q9P0L9 805 aa27.78■■■□□ 2.04
HOXC9-201ENST00000303450 Q9Y3F1 56 aa27.78■■■□□ 2.04
HOXC9-201ENST00000303450 DYNC1LI2O43237 492 aaPredicted RBP27.77■■■□□ 2.04
HOXC9-201ENST00000303450 SGPL1O95470 568 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 PTGS1P23219 599 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 TRAPPC10P48553 1259 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 SP2Q02086 613 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 NEDD9Q14511 834 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 Q4G0T1 1027 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 BRAPQ7Z569 592 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 MBOAT7Q96N66 472 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 SENP7Q9BQF6 1050 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 GH1P01241 217 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 GIMAP8Q8ND71 665 aaPredicted RBP27.77■■■□□ 2.04
HOXC9-201ENST00000303450 OR6J1Q8NGC5 347 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 LENG9Q96B70 501 aa27.77■■■□□ 2.04
HOXC9-201ENST00000303450 AGO4Q9HCK5 861 aaKnown RBP27.77■■■□□ 2.04
HOXC9-201ENST00000303450 ATP9AO75110 1047 aa27.76■■■□□ 2.03
HOXC9-201ENST00000303450 GGPS1O95749 300 aa27.76■■■□□ 2.03
HOXC9-201ENST00000303450 PGK1P00558 417 aa27.76■■■□□ 2.03
HOXC9-201ENST00000303450 TFRCP02786 760 aaKnown RBP27.76■■■□□ 2.03
HOXC9-201ENST00000303450 GJA8P48165 433 aa27.76■■■□□ 2.03
HOXC9-201ENST00000303450 DHX37Q8IY37 1157 aaKnown RBP27.76■■■□□ 2.03
HOXC9-201ENST00000303450 ZNF577Q9BSK1 485 aa27.76■■■□□ 2.03
HOXC9-201ENST00000303450 MLXIPQ9HAP2 919 aa27.76■■■□□ 2.03
HOXC9-201ENST00000303450 SYNRGQ9UMZ2 1314 aa27.76■■■□□ 2.03
HOXC9-201ENST00000303450 MYCNP04198 464 aaPredicted RBP27.75■■■□□ 2.03
HOXC9-201ENST00000303450 KCNA2P16389 499 aa27.75■■■□□ 2.03
HOXC9-201ENST00000303450 RILPL1Q5EBL4 403 aa27.75■■■□□ 2.03
HOXC9-201ENST00000303450 TTC38Q5R3I4 469 aa27.75■■■□□ 2.03
HOXC9-201ENST00000303450 CELF3Q5SZQ8 465 aaKnown RBP27.75■■■□□ 2.03
HOXC9-201ENST00000303450 ZSCAN16Q9H4T2 348 aaPredicted RBP27.75■■■□□ 2.03
HOXC9-201ENST00000303450 FRMPD3Q5JV73 1810 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 IPO5O00410 1097 aaKnown RBP27.74■■■□□ 2.03
HOXC9-201ENST00000303450 SLC37A4O43826 429 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 SORBS3O60504 671 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 C6orf222P0C671 652 aaPredicted RBP27.74■■■□□ 2.03
HOXC9-201ENST00000303450 GJA9P57773 515 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 ARHGAP1Q07960 439 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 LAMC2Q13753 1193 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 CYFIP1Q7L576 1253 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 UIMC1Q96RL1 719 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 SDF4Q9BRK5 362 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 CRISPLD2Q9H0B8 497 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 UPF3AQ9H1J1 476 aaKnown RBP27.74■■■□□ 2.03
HOXC9-201ENST00000303450 OGDHLQ9ULD0 1010 aa27.74■■■□□ 2.03
HOXC9-201ENST00000303450 CCDC85CA6NKD9 419 aa27.73■■■□□ 2.03
HOXC9-201ENST00000303450 WNT7AO00755 349 aa27.73■■■□□ 2.03
HOXC9-201ENST00000303450 MSH4O15457 936 aa27.73■■■□□ 2.03
HOXC9-201ENST00000303450 MCM7P33993 719 aa27.73■■■□□ 2.03
HOXC9-201ENST00000303450 RESTQ13127 1097 aa27.73■■■□□ 2.03
HOXC9-201ENST00000303450 FOXD4L5Q5VV16 416 aaPredicted RBP27.73■■■□□ 2.03
HOXC9-201ENST00000303450 MYSM1Q5VVJ2 828 aa27.73■■■□□ 2.03
HOXC9-201ENST00000303450 RNF180Q86T96 592 aa27.73■■■□□ 2.03
HOXC9-201ENST00000303450 ARRDC4Q8NCT1 418 aa27.73■■■□□ 2.03
HOXC9-201ENST00000303450 FOXD4L4Q8WXT5 416 aaPredicted RBP27.73■■■□□ 2.03
HOXC9-201ENST00000303450 BRCA2P51587 3418 aa27.73■■■□□ 2.03
HOXC9-201ENST00000303450 ADAMTS4O75173 837 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 ZSCAN22P10073 491 aaPredicted RBP27.72■■■□□ 2.03
HOXC9-201ENST00000303450 TOB1P50616 345 aaPredicted RBP27.72■■■□□ 2.03
HOXC9-201ENST00000303450 PKP1Q13835 747 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 ZNF174Q15697 407 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms