RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 BFSP2Q13515 415 aa29.19■■■□□ 2.26
U2AF1-201ENST00000291552 GPNMBQ14956 572 aa29.19■■■□□ 2.26
U2AF1-201ENST00000291552 HSDL1Q3SXM5 330 aa29.19■■■□□ 2.26
U2AF1-201ENST00000291552 CASC1Q6TDU7 716 aa29.19■■■□□ 2.26
U2AF1-201ENST00000291552 BCAS3Q9H6U6 928 aa29.19■■■□□ 2.26
U2AF1-201ENST00000291552 TTC28Q96AY4 2481 aa29.19■■■□□ 2.26
U2AF1-201ENST00000291552 MCM5P33992 734 aa29.18■■■□□ 2.26
U2AF1-201ENST00000291552 MRPS9P82933 396 aaKnown RBP29.18■■■□□ 2.26
U2AF1-201ENST00000291552 ADGRE1Q14246 886 aa29.18■■■□□ 2.26
U2AF1-201ENST00000291552 MFSD10Q14728 455 aa29.18■■■□□ 2.26
U2AF1-201ENST00000291552 NECTIN1Q15223 517 aa29.18■■■□□ 2.26
U2AF1-201ENST00000291552 RETREG2Q8NC44 543 aa29.18■■■□□ 2.26
U2AF1-201ENST00000291552 CTCFLQ8NI51 663 aaPredicted RBP29.18■■■□□ 2.26
U2AF1-201ENST00000291552 ALG1Q9BT22 464 aa29.18■■■□□ 2.26
U2AF1-201ENST00000291552 REV3LO60673 3130 aa29.17■■■□□ 2.26
U2AF1-201ENST00000291552 ATP2A2P16615 1042 aaKnown RBP29.17■■■□□ 2.26
U2AF1-201ENST00000291552 RXRAP19793 462 aa29.17■■■□□ 2.26
U2AF1-201ENST00000291552 RBL2Q08999 1139 aa29.17■■■□□ 2.26
U2AF1-201ENST00000291552 SEMA3FQ13275 785 aa29.17■■■□□ 2.26
U2AF1-201ENST00000291552 HIC1Q14526 733 aa29.17■■■□□ 2.26
U2AF1-201ENST00000291552 KCNV1Q6PIU1 500 aa29.17■■■□□ 2.26
U2AF1-201ENST00000291552 SRBD1Q8N5C6 995 aaKnown RBP29.17■■■□□ 2.26
U2AF1-201ENST00000291552 KIAA0753Q2KHM9 967 aa29.16■■■□□ 2.26
U2AF1-201ENST00000291552 CAGE1Q8TC20 777 aa29.16■■■□□ 2.26
U2AF1-201ENST00000291552 WNT8BQ93098 351 aa29.16■■■□□ 2.26
U2AF1-201ENST00000291552 TMEM87BQ96K49 555 aa29.16■■■□□ 2.26
U2AF1-201ENST00000291552 SPATA33Q96N06 139 aa29.16■■■□□ 2.26
U2AF1-201ENST00000291552 LRRC2Q9BYS8 371 aa29.16■■■□□ 2.26
U2AF1-201ENST00000291552 ANO2Q9NQ90 1003 aa29.16■■■□□ 2.26
U2AF1-201ENST00000291552 PCDHA11Q9Y5I1 949 aa29.16■■■□□ 2.26
U2AF1-201ENST00000291552 SMARCA1P28370 1054 aa29.15■■■□□ 2.26
U2AF1-201ENST00000291552 KIF5BP33176 963 aa29.15■■■□□ 2.26
U2AF1-201ENST00000291552 BMP2KLQ5H9B9 411 aa29.15■■■□□ 2.26
U2AF1-201ENST00000291552 RAB11FIP4Q86YS3 637 aa29.15■■■□□ 2.26
U2AF1-201ENST00000291552 CMTR1Q8N1G2 835 aaKnown RBP29.15■■■□□ 2.26
U2AF1-201ENST00000291552 AFAP1L1Q8TED9 768 aa29.15■■■□□ 2.26
U2AF1-201ENST00000291552 RRP36Q96EU6 259 aaKnown RBP29.15■■■□□ 2.26
U2AF1-201ENST00000291552 INPP4AQ96PE3 977 aaPredicted RBP29.15■■■□□ 2.26
U2AF1-201ENST00000291552 KATNAL1Q9BW62 490 aa29.15■■■□□ 2.26
U2AF1-201ENST00000291552 TGFB3P10600 412 aa29.14■■■□□ 2.26
U2AF1-201ENST00000291552 ZNF200P98182 395 aaPredicted RBP29.14■■■□□ 2.26
U2AF1-201ENST00000291552 TRIM71Q2Q1W2 868 aaKnown RBP29.14■■■□□ 2.26
U2AF1-201ENST00000291552 USP17L6PQ6QN14 398 aa29.14■■■□□ 2.26
U2AF1-201ENST00000291552 NFXL1Q6ZNB6 911 aa29.14■■■□□ 2.26
U2AF1-201ENST00000291552 CCDC155Q8N6L0 562 aa29.14■■■□□ 2.26
U2AF1-201ENST00000291552 C7orf31Q8N865 590 aa29.14■■■□□ 2.26
U2AF1-201ENST00000291552 C16orf70Q9BSU1 422 aa29.14■■■□□ 2.26
U2AF1-201ENST00000291552 SLC28A3Q9HAS3 691 aa29.14■■■□□ 2.26
U2AF1-201ENST00000291552 MEIS2O14770 477 aa29.13■■■□□ 2.25
U2AF1-201ENST00000291552 PPFIA4O75335 1185 aa29.13■■■□□ 2.25
U2AF1-201ENST00000291552 ACTN1P12814 892 aa29.13■■■□□ 2.25
U2AF1-201ENST00000291552 SELPP16109 830 aa29.13■■■□□ 2.25
U2AF1-201ENST00000291552 LIFRP42702 1097 aa29.13■■■□□ 2.25
U2AF1-201ENST00000291552 TRAF7Q6Q0C0 670 aa29.13■■■□□ 2.25
U2AF1-201ENST00000291552 GAS2L1Q99501 681 aaPredicted RBP29.13■■■□□ 2.25
U2AF1-201ENST00000291552 CCDC69A6NI79 296 aa29.12■■■□□ 2.25
U2AF1-201ENST00000291552 ICAM3P32942 547 aa29.12■■■□□ 2.25
U2AF1-201ENST00000291552 TCTN1Q2MV58 587 aa29.12■■■□□ 2.25
U2AF1-201ENST00000291552 LRRC8DQ7L1W4 858 aa29.12■■■□□ 2.25
U2AF1-201ENST00000291552 CENPQQ7L2Z9 268 aaPredicted RBP29.12■■■□□ 2.25
U2AF1-201ENST00000291552 LZTS2Q9BRK4 669 aa29.12■■■□□ 2.25
U2AF1-201ENST00000291552 FTOQ9C0B1 505 aaKnown RBP eCLIP29.12■■■□□ 2.25
U2AF1-201ENST00000291552 PRDM6Q9NQX0 595 aa29.12■■■□□ 2.25
U2AF1-201ENST00000291552 TELO2Q9Y4R8 837 aa29.12■■■□□ 2.25
U2AF1-201ENST00000291552 PIK3CDO00329 1044 aa29.11■■■□□ 2.25
U2AF1-201ENST00000291552 ARHGEF15O94989 841 aa29.11■■■□□ 2.25
U2AF1-201ENST00000291552 CKBP12277 381 aa29.11■■■□□ 2.25
U2AF1-201ENST00000291552 PPP2R2DQ66LE6 453 aa29.11■■■□□ 2.25
U2AF1-201ENST00000291552 TMTC2Q8N394 836 aa29.11■■■□□ 2.25
U2AF1-201ENST00000291552 SLC9A7Q96T83 725 aa29.11■■■□□ 2.25
U2AF1-201ENST00000291552 PRRC2BQ5JSZ5 2229 aaKnown RBP29.1■■■□□ 2.25
U2AF1-201ENST00000291552 MICAL3Q7RTP6 2002 aa29.1■■■□□ 2.25
U2AF1-201ENST00000291552 hCG_1642624A0A1W2PR95 340 aa29.1■■■□□ 2.25
U2AF1-201ENST00000291552 SPATA31C2B4DYI2 1134 aa29.1■■■□□ 2.25
U2AF1-201ENST00000291552 NBNO60934 754 aa29.1■■■□□ 2.25
U2AF1-201ENST00000291552 GNAQP50148 359 aa29.1■■■□□ 2.25
U2AF1-201ENST00000291552 PTK7Q13308 1070 aa29.1■■■□□ 2.25
U2AF1-201ENST00000291552 MLXIPQ9HAP2 919 aa29.1■■■□□ 2.25
U2AF1-201ENST00000291552 RTEL1Q9NZ71 1219 aa29.1■■■□□ 2.25
U2AF1-201ENST00000291552 SEC63Q9UGP8 760 aaKnown RBP29.1■■■□□ 2.25
U2AF1-201ENST00000291552 STAM2O75886 525 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 CXCL10P02778 98 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 LGALS2P05162 132 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 CA3P07451 260 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 MBTPS1Q14703 1052 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 GNPTABQ3T906 1256 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 PCNX4Q63HM2 1172 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 TMTC3Q6ZXV5 915 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 SGMS1Q86VZ5 419 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 SMARCC2Q8TAQ2 1214 aa29.09■■■□□ 2.25
U2AF1-201ENST00000291552 KAT6AQ92794 2004 aa29.08■■■□□ 2.25
U2AF1-201ENST00000291552 BAIAP3O94812 1187 aa29.08■■■□□ 2.25
U2AF1-201ENST00000291552 CALM1P0DP23 149 aa29.08■■■□□ 2.25
U2AF1-201ENST00000291552 CALM2P0DP24 149 aa29.08■■■□□ 2.25
U2AF1-201ENST00000291552 CALM3P0DP25 149 aa29.08■■■□□ 2.25
U2AF1-201ENST00000291552 HOXC8P31273 242 aa29.08■■■□□ 2.25
U2AF1-201ENST00000291552 HERC6Q8IVU3 1022 aa29.08■■■□□ 2.25
U2AF1-201ENST00000291552 PHOSPHO2Q8TCD6 241 aa29.08■■■□□ 2.25
U2AF1-201ENST00000291552 COL4A4P53420 1690 aaPredicted RBP29.08■■■□□ 2.25
U2AF1-201ENST00000291552 FIBPO43427 364 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms