RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SPATA33Q96N06 139 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 COL25A1Q9BXS0 654 aaPredicted RBP21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 BCAS3Q9H6U6 928 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 SLC28A3Q9HAS3 691 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 ATP2A2P16615 1042 aaKnown RBP21.97■■□□□ 1.11
TM6SF1-201ENST00000258909 UBA1P22314 1058 aaKnown RBP21.97■■□□□ 1.11
TM6SF1-201ENST00000258909 NECTIN1Q15223 517 aa21.97■■□□□ 1.11
TM6SF1-201ENST00000258909 KIAA0753Q2KHM9 967 aa21.97■■□□□ 1.11
TM6SF1-201ENST00000258909 PPM1EQ8WY54 764 aa21.97■■□□□ 1.11
TM6SF1-201ENST00000258909 DHX38Q92620 1227 aaKnown RBP21.97■■□□□ 1.11
TM6SF1-201ENST00000258909 RRP36Q96EU6 259 aaKnown RBP21.97■■□□□ 1.11
TM6SF1-201ENST00000258909 GTF2IRD1Q9UHL9 959 aa21.97■■□□□ 1.11
TM6SF1-201ENST00000258909 CCDC69A6NI79 296 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 F2P00734 622 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 KIF5BP33176 963 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 RFC2P35250 354 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 MRPS9P82933 396 aaKnown RBP21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 KCNV1Q6PIU1 500 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 USP17L6PQ6QN14 398 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 SRBD1Q8N5C6 995 aaKnown RBP21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 GAS2L1Q99501 681 aaPredicted RBP21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 MAP3K14Q99558 947 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 SPZ1Q9BXG8 430 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 RTEL1Q9NZ71 1219 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 DOCK5Q9H7D0 1870 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 ACTN1P12814 892 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 ZNF200P98182 395 aaPredicted RBP21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 ADGRE1Q14246 886 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 TMEM87BQ96K49 555 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 KATNAL1Q9BW62 490 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 MLXIPQ9HAP2 919 aa21.96■■□□□ 1.11
TM6SF1-201ENST00000258909 hCG_1642624A0A1W2PR95 340 aa21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 HAS3O00219 553 aa21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 PPFIA4O75335 1185 aa21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 CCDC82Q8N4S0 544 aa21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 CCDC155Q8N6L0 562 aa21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 SMARCC2Q8TAQ2 1214 aa21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 CAGE1Q8TC20 777 aa21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 MTA3Q9BTC8 594 aa21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 SEC63Q9UGP8 760 aaKnown RBP21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 PCDHA11Q9Y5I1 949 aa21.95■■□□□ 1.1
TM6SF1-201ENST00000258909 TGFB3P10600 412 aa21.94■■□□□ 1.1
TM6SF1-201ENST00000258909 HOXD8P13378 290 aaPredicted RBP21.94■■□□□ 1.1
TM6SF1-201ENST00000258909 HIC1Q14526 733 aa21.94■■□□□ 1.1
TM6SF1-201ENST00000258909 GPNMBQ14956 572 aa21.94■■□□□ 1.1
TM6SF1-201ENST00000258909 BMP2KLQ5H9B9 411 aa21.94■■□□□ 1.1
TM6SF1-201ENST00000258909 PPP2R2DQ66LE6 453 aa21.94■■□□□ 1.1
TM6SF1-201ENST00000258909 LRRC8DQ7L1W4 858 aa21.94■■□□□ 1.1
TM6SF1-201ENST00000258909 TMTC2Q8N394 836 aa21.94■■□□□ 1.1
TM6SF1-201ENST00000258909 AFAP1L1Q8TED9 768 aa21.94■■□□□ 1.1
TM6SF1-201ENST00000258909 FRMPD4Q14CM0 1322 aa21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 CKBP12277 381 aa21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 SELPP16109 830 aa21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 IGFBP4P22692 258 aa21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 CENPQQ7L2Z9 268 aaPredicted RBP21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 WNT8BQ93098 351 aa21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 LZTS2Q9BRK4 669 aa21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 PRDM6Q9NQX0 595 aa21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 SLC12A7Q9Y666 1083 aa21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 SPTBN5Q9NRC6 3674 aaKnown RBP21.93■■□□□ 1.1
TM6SF1-201ENST00000258909 MEIS2O14770 477 aa21.92■■□□□ 1.1
TM6SF1-201ENST00000258909 SMARCA1P28370 1054 aa21.92■■□□□ 1.1
TM6SF1-201ENST00000258909 LIFRP42702 1097 aa21.92■■□□□ 1.1
TM6SF1-201ENST00000258909 GNAQP50148 359 aa21.92■■□□□ 1.1
TM6SF1-201ENST00000258909 SEMA3FQ13275 785 aa21.92■■□□□ 1.1
TM6SF1-201ENST00000258909 GNPTABQ3T906 1256 aa21.92■■□□□ 1.1
TM6SF1-201ENST00000258909 CUL5Q93034 780 aa21.92■■□□□ 1.1
TM6SF1-201ENST00000258909 C16orf70Q9BSU1 422 aa21.92■■□□□ 1.1
TM6SF1-201ENST00000258909 TELO2Q9Y4R8 837 aa21.92■■□□□ 1.1
TM6SF1-201ENST00000258909 TRANK1O15050 2925 aa21.91■■□□□ 1.1
TM6SF1-201ENST00000258909 SPATA31C2B4DYI2 1134 aa21.91■■□□□ 1.1
TM6SF1-201ENST00000258909 CA3P07451 260 aa21.91■■□□□ 1.1
TM6SF1-201ENST00000258909 CCDC85BQ15834 202 aaPredicted RBP21.91■■□□□ 1.1
TM6SF1-201ENST00000258909 CYFIP1Q7L576 1253 aa21.91■■□□□ 1.1
TM6SF1-201ENST00000258909 INPP4AQ96PE3 977 aaPredicted RBP21.91■■□□□ 1.1
TM6SF1-201ENST00000258909 REV3LO60673 3130 aa21.91■■□□□ 1.1
TM6SF1-201ENST00000258909 PTPRSQ13332 1948 aa21.91■■□□□ 1.1
TM6SF1-201ENST00000258909 NBNO60934 754 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 CALM1P0DP23 149 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 CALM2P0DP24 149 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 CALM3P0DP25 149 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 ICAM3P32942 547 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 PTK7Q13308 1070 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 TMCO2Q7Z6W1 182 aaPredicted RBP21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 MICU3Q86XE3 530 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 TCEANC2Q96MN5 208 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 SLC9A7Q96T83 725 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 CERS4Q9HA82 394 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 NOP56O00567 594 aaKnown RBP21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 LGALS2P05162 132 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 SP4Q02446 784 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 TCTN1Q2MV58 587 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 TRIM71Q2Q1W2 868 aaKnown RBP21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 ZNF618Q5T7W0 954 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 HERC6Q8IVU3 1022 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 FANCBQ8NB91 859 aa21.9■■□□□ 1.1
TM6SF1-201ENST00000258909 H3BRB1 525 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 RFXAPO00287 272 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 PIK3CDO00329 1044 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 FIBPO43427 364 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms