RNA–Protein interactions for RNA: ENST00000248451.7

PNKD-201, Transcript of PNKD, MBL domain containing, humanhuman

TSL 1 (best) BASIC

Gene PNKD, Length 758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-201ENST00000248451 NOD1Q9Y239 953 aa18.47■□□□□ 0.55
PNKD-201ENST00000248451 GGPS1O95749 300 aa18.46■□□□□ 0.55
PNKD-201ENST00000248451 MRPS9P82933 396 aaKnown RBP18.46■□□□□ 0.55
PNKD-201ENST00000248451 MFSD10Q14728 455 aa18.46■□□□□ 0.55
PNKD-201ENST00000248451 NECTIN1Q15223 517 aa18.46■□□□□ 0.55
PNKD-201ENST00000248451 KCNV1Q6PIU1 500 aa18.46■□□□□ 0.55
PNKD-201ENST00000248451 RETREG2Q8NC44 543 aa18.46■□□□□ 0.55
PNKD-201ENST00000248451 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
PNKD-201ENST00000248451 PIBF1Q8WXW3 757 aa18.46■□□□□ 0.55
PNKD-201ENST00000248451 KATNAL1Q9BW62 490 aa18.46■□□□□ 0.55
PNKD-201ENST00000248451 PCDHA11Q9Y5I1 949 aa18.46■□□□□ 0.55
PNKD-201ENST00000248451 SPTBN5Q9NRC6 3674 aaKnown RBP18.45■□□□□ 0.54
PNKD-201ENST00000248451 SORBS3O60504 671 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 PLEKHA8P1O95397 391 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 TGFB3P10600 412 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 SMARCA1P28370 1054 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 MCM5P33992 734 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 SEMA3FQ13275 785 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 HIC1Q14526 733 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 KIAA0753Q2KHM9 967 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 TRIM71Q2Q1W2 868 aaKnown RBP18.45■□□□□ 0.54
PNKD-201ENST00000248451 CREB3L3Q68CJ9 461 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 TRAF7Q6Q0C0 670 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 CASC1Q6TDU7 716 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 CTCFLQ8NI51 663 aaPredicted RBP18.45■□□□□ 0.54
PNKD-201ENST00000248451 WNT8BQ93098 351 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 TMEM87BQ96K49 555 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 SPATA33Q96N06 139 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 INPP4AQ96PE3 977 aaPredicted RBP18.45■□□□□ 0.54
PNKD-201ENST00000248451 GAS2L1Q99501 681 aaPredicted RBP18.45■□□□□ 0.54
PNKD-201ENST00000248451 ALG1Q9BT22 464 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 BCAS3Q9H6U6 928 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 SLC28A3Q9HAS3 691 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 TTC28Q96AY4 2481 aa18.45■□□□□ 0.54
PNKD-201ENST00000248451 RBAK-RBAKDNI3L0D1 243 aa18.44■□□□□ 0.54
PNKD-201ENST00000248451 PPFIA4O75335 1185 aa18.44■□□□□ 0.54
PNKD-201ENST00000248451 ACTN1P12814 892 aa18.44■□□□□ 0.54
PNKD-201ENST00000248451 BMP2KLQ5H9B9 411 aa18.44■□□□□ 0.54
PNKD-201ENST00000248451 LRRC8DQ7L1W4 858 aa18.44■□□□□ 0.54
PNKD-201ENST00000248451 SRBD1Q8N5C6 995 aaKnown RBP18.44■□□□□ 0.54
PNKD-201ENST00000248451 CCDC155Q8N6L0 562 aa18.44■□□□□ 0.54
PNKD-201ENST00000248451 C7orf31Q8N865 590 aa18.44■□□□□ 0.54
PNKD-201ENST00000248451 SLC9A7Q96T83 725 aa18.44■□□□□ 0.54
PNKD-201ENST00000248451 C16orf70Q9BSU1 422 aa18.44■□□□□ 0.54
PNKD-201ENST00000248451 MEIS2O14770 477 aa18.43■□□□□ 0.54
PNKD-201ENST00000248451 CKBP12277 381 aa18.43■□□□□ 0.54
PNKD-201ENST00000248451 SELPP16109 830 aa18.43■□□□□ 0.54
PNKD-201ENST00000248451 RXRAP19793 462 aa18.43■□□□□ 0.54
PNKD-201ENST00000248451 ICAM3P32942 547 aa18.43■□□□□ 0.54
PNKD-201ENST00000248451 KIF5BP33176 963 aa18.43■□□□□ 0.54
PNKD-201ENST00000248451 LIFRP42702 1097 aa18.43■□□□□ 0.54
PNKD-201ENST00000248451 ZNF200P98182 395 aaPredicted RBP18.43■□□□□ 0.54
PNKD-201ENST00000248451 PPP2R2DQ66LE6 453 aa18.43■□□□□ 0.54
PNKD-201ENST00000248451 RRP36Q96EU6 259 aaKnown RBP18.43■□□□□ 0.54
PNKD-201ENST00000248451 PRDM6Q9NQX0 595 aa18.43■□□□□ 0.54
PNKD-201ENST00000248451 PIK3CDO00329 1044 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 NBNO60934 754 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 STAM2O75886 525 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 BAIAP3O94812 1187 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 ARHGEF15O94989 841 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 CXCL10P02778 98 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 HOXC8P31273 242 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 PTK7Q13308 1070 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 TCTN1Q2MV58 587 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 USP17L6PQ6QN14 398 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 CMTR1Q8N1G2 835 aaKnown RBP18.42■□□□□ 0.54
PNKD-201ENST00000248451 TMTC2Q8N394 836 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 PHOSPHO2Q8TCD6 241 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 LZTS2Q9BRK4 669 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 FTOQ9C0B1 505 aaKnown RBP eCLIP18.42■□□□□ 0.54
PNKD-201ENST00000248451 ANO2Q9NQ90 1003 aa18.42■□□□□ 0.54
PNKD-201ENST00000248451 CCDC69A6NI79 296 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 SPATA31C2B4DYI2 1134 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 CA3P07451 260 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 GNAQP50148 359 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 MBTPS1Q14703 1052 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 GNPTABQ3T906 1256 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 NFXL1Q6ZNB6 911 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 RAB11FIP4Q86YS3 637 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 HERC6Q8IVU3 1022 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 MLXIPQ9HAP2 919 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 TELO2Q9Y4R8 837 aa18.41■□□□□ 0.54
PNKD-201ENST00000248451 COL4A4P53420 1690 aaPredicted RBP18.41■□□□□ 0.54
PNKD-201ENST00000248451 FIBPO43427 364 aa18.4■□□□□ 0.54
PNKD-201ENST00000248451 LGALS2P05162 132 aa18.4■□□□□ 0.54
PNKD-201ENST00000248451 NEFLP07196 543 aa18.4■□□□□ 0.54
PNKD-201ENST00000248451 WDR5P61964 334 aaKnown RBP18.4■□□□□ 0.54
PNKD-201ENST00000248451 PCNX4Q63HM2 1172 aa18.4■□□□□ 0.54
PNKD-201ENST00000248451 METTL7BQ6UX53 244 aa18.4■□□□□ 0.54
PNKD-201ENST00000248451 TMTC3Q6ZXV5 915 aa18.4■□□□□ 0.54
PNKD-201ENST00000248451 CENPQQ7L2Z9 268 aaPredicted RBP18.4■□□□□ 0.54
PNKD-201ENST00000248451 SGMS1Q86VZ5 419 aa18.4■□□□□ 0.54
PNKD-201ENST00000248451 RTEL1Q9NZ71 1219 aa18.4■□□□□ 0.54
PNKD-201ENST00000248451 SEC63Q9UGP8 760 aaKnown RBP18.4■□□□□ 0.54
PNKD-201ENST00000248451 MICAL3Q7RTP6 2002 aa18.4■□□□□ 0.54
PNKD-201ENST00000248451 PRRC2BQ5JSZ5 2229 aaKnown RBP18.39■□□□□ 0.54
PNKD-201ENST00000248451 PARNO95453 639 aaKnown RBP18.39■□□□□ 0.53
PNKD-201ENST00000248451 CALM1P0DP23 149 aa18.39■□□□□ 0.53
PNKD-201ENST00000248451 CALM2P0DP24 149 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms