RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 IFI16Q16666 785 aaKnown RBP17.3■□□□□ 0.36
PXN-201ENST00000228307 NLGN1Q8N2Q7 840 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 PCDHA4Q9UN74 947 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 MYBL2P10244 700 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 SEC24CP53992 1094 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 DAAM2Q86T65 1068 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 GDF11O95390 407 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 PMS1P54277 932 aaKnown RBP17.3■□□□□ 0.36
PXN-201ENST00000228307 CACNB1Q02641 598 aaPredicted RBP17.3■□□□□ 0.36
PXN-201ENST00000228307 ASIC2Q16515 512 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 TBC1D16Q8TBP0 767 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 LRRC45Q96CN5 670 aa17.3■□□□□ 0.36
PXN-201ENST00000228307 TARSL2A2RTX5 802 aaKnown RBP17.29■□□□□ 0.36
PXN-201ENST00000228307 ACTN3Q08043 901 aaPredicted RBP17.29■□□□□ 0.36
PXN-201ENST00000228307 DDR1Q08345 913 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 STK4Q13043 487 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 CALCRLQ16602 461 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 RC3H1Q5TC82 1133 aaKnown RBP17.29■□□□□ 0.36
PXN-201ENST00000228307 KCTD1Q719H9 257 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 ELOA2Q8IYF1 753 aaPredicted RBP17.29■□□□□ 0.36
PXN-201ENST00000228307 CAPN6Q9Y6Q1 641 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 TMEM110-MUSTN1A8MSY1 372 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 TCP10L2B9ZVM9 353 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 WNT7AO00755 349 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 EIF3HO15372 352 aaKnown RBP eCLIP17.29■□□□□ 0.36
PXN-201ENST00000228307 USH1GQ495M9 461 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 ALS2CLQ60I27 953 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 DEFB132Q7Z7B7 95 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 COL23A1Q86Y22 540 aaPredicted RBP17.29■□□□□ 0.36
PXN-201ENST00000228307 MYO1FO00160 1098 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 PPP1R2P41236 205 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 COA7Q96BR5 231 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 AP1M1Q9BXS5 423 aa17.29■□□□□ 0.36
PXN-201ENST00000228307 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
PXN-201ENST00000228307 SYF2O95926 243 aaKnown RBP17.28■□□□□ 0.36
PXN-201ENST00000228307 RPSAP08865 295 aaKnown RBP17.28■□□□□ 0.36
PXN-201ENST00000228307 CCDC172P0C7W6 258 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 GUCY2CP25092 1073 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 ARL6IP4Q66PJ3 421 aaKnown RBP17.28■□□□□ 0.36
PXN-201ENST00000228307 RUFY4Q6ZNE9 571 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 PEX26Q7Z412 305 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 PDE2AO00408 941 aaPredicted RBP17.28■□□□□ 0.36
PXN-201ENST00000228307 ZNF76P36508 570 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 CARSP49589 748 aaKnown RBP17.28■□□□□ 0.36
PXN-201ENST00000228307 REXO1Q8N1G1 1221 aaKnown RBP17.28■□□□□ 0.36
PXN-201ENST00000228307 TBC1D31Q96DN5 1066 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 RBM12Q9NTZ6 932 aaKnown RBP17.28■□□□□ 0.36
PXN-201ENST00000228307 PLEKHG2Q9H7P9 1386 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 SPATA31A6Q5VVP1 1343 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 A0A1W2PQC6 194 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 KRIT1O00522 736 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 PALMO75781 387 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 BBOX1O75936 387 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 CDK8P49336 464 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 APBA1Q02410 837 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 KRT25Q7Z3Z0 450 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 ANKS4BQ8N8V4 417 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 ZNF512BQ96KM6 892 aaPredicted RBP17.28■□□□□ 0.36
PXN-201ENST00000228307 TMOD2Q9NZR1 351 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 TSKSQ9UJT2 592 aa17.28■□□□□ 0.36
PXN-201ENST00000228307 MAN2A1Q16706 1144 aa17.27■□□□□ 0.36
PXN-201ENST00000228307 VWA3BQ502W6 1294 aa17.27■□□□□ 0.36
PXN-201ENST00000228307 FAM133AQ8N9E0 248 aa17.27■□□□□ 0.36
PXN-201ENST00000228307 TMEM60Q9H2L4 133 aa17.27■□□□□ 0.36
PXN-201ENST00000228307 CLNS1AP54105 237 aaKnown RBP17.27■□□□□ 0.36
PXN-201ENST00000228307 PPP1R7Q15435 360 aa17.27■□□□□ 0.36
PXN-201ENST00000228307 NEK8Q86SG6 692 aa17.27■□□□□ 0.36
PXN-201ENST00000228307 CACNA2D3Q8IZS8 1091 aa17.27■□□□□ 0.36
PXN-201ENST00000228307 LRRC27Q9C0I9 530 aa17.27■□□□□ 0.36
PXN-201ENST00000228307 PLAAQ9Y263 795 aa17.27■□□□□ 0.36
PXN-201ENST00000228307 SRGNP10124 158 aa17.27■□□□□ 0.35
PXN-201ENST00000228307 SLC1A4P43007 532 aa17.27■□□□□ 0.35
PXN-201ENST00000228307 PFKFB3Q16875 520 aaPredicted RBP17.27■□□□□ 0.35
PXN-201ENST00000228307 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.35
PXN-201ENST00000228307 LARGE2Q8N3Y3 721 aa17.27■□□□□ 0.35
PXN-201ENST00000228307 ZIM3Q96PE6 472 aa17.27■□□□□ 0.35
PXN-201ENST00000228307 PPP1R12BO60237 982 aaPredicted RBP17.26■□□□□ 0.35
PXN-201ENST00000228307 HNRNPH1P31943 449 aaKnown RBP17.26■□□□□ 0.35
PXN-201ENST00000228307 AOC3Q16853 763 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 PCDHAC2Q9Y5I4 1007 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 ABCB4P21439 1286 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 CCDC26Q8TAB7 109 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 NCAPGQ9BPX3 1015 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 STK32BQ9NY57 414 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 PNPLA7Q6ZV29 1317 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 GOLGA6L10A0A0M3HER8 536 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 PRKG1Q13976 671 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 TBCKQ8TEA7 893 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 CEP95Q96GE4 821 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 PIGSQ96S52 555 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 NOVA2Q9UNW9 492 aaKnown RBP17.26■□□□□ 0.35
PXN-201ENST00000228307 DISP2A7MBM2 1401 aa17.26■□□□□ 0.35
PXN-201ENST00000228307 CETN3O15182 167 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 ECM2O94769 699 aaPredicted RBP17.25■□□□□ 0.35
PXN-201ENST00000228307 ZBTB7AO95365 584 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 PKN1Q16512 942 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 ZNF384Q8TF68 577 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 TEKT1Q969V4 418 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 TMEM47Q9BQJ4 181 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms