RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Wdr78E9PYY5 807 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Lrrc55Q3UY51 311 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Ddx55Q6ZPL9 600 aaKnown RBP28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Pdcl3Q8BVF2 240 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Epc2Q8C0I4 808 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Pip4k2aO70172 405 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 ArP19091 899 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Psmc6P62334 389 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Erbb2P70424 1256 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Gucy2cQ3UWA6 1072 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Slc9a2Q3ZAS0 814 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Dph1Q5NCQ5 438 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Igbp1Q61249 340 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Dcaf15Q6PFH3 600 aa28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 RnmtQ9D0L8 465 aaKnown RBP28.66■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Magea10A2AMW4 325 aa28.65■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Znf652Q5DU09 608 aa28.65■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Krt14Q61781 484 aa28.65■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Nipa1Q8BHK1 323 aa28.65■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Q8C5C9 218 aa28.65■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Stk32bQ9JJX8 414 aa28.65■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Trappc11B2RXC1 1133 aa28.64■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Orc4O88708 433 aa28.64■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Tnfaip8l3Q3TBL6 204 aa28.64■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Gprin1Q3UNH4 932 aa28.64■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Tmem132dQ76HP3 1097 aa28.64■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Siglec10Q80ZE3 688 aa28.64■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Drd5Q8BLD9 478 aa28.64■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Dqx1Q924H9 718 aa28.64■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Cntnap5cQ0V8T7 1305 aa28.64■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Hmgb1P63158 215 aaKnown RBP28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Fdxacb1Q3UY23 622 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Rsad1Q5SUV1 442 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 BcamQ9R069 622 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Megf6Q80V70 1572 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Krt36B1AQ75 473 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Gm38392E9Q2A2 434 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Itgb5O70309 798 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Prkg1P0C605 671 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Mei4Q8BRM6 389 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Ccdc113Q8C5T8 377 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Tbc1d10cQ8C9V1 444 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Nemp2Q8CB65 421 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 CenpqQ9CPQ5 267 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Eya4Q9Z191 616 aa28.63■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Arhgap6O54834 987 aa28.62■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Tpm2P58774 284 aa28.62■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Rps6P62754 249 aaKnown RBP28.62■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Rit2P70425 217 aa28.62■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Mcm7Q61881 719 aaKnown RBP28.62■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Trak2Q6P9N8 913 aa28.62■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Recql4Q75NR7 1216 aaKnown RBP28.62■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Gm44503E9PYU5 387 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 PtgdrP70263 357 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 KhsrpQ3U0V1 748 aaKnown RBP28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 4933427I04RikQ3V053 235 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Tsg101Q61187 391 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Herc4Q6PAV2 1057 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Prpf40bQ80W14 870 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Lrrc41Q8K1C9 807 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Slc25a38Q91XD8 326 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Vmn2r79E9Q067 851 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Serpina1aP07758 413 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Serpina1bP22599 413 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Hoxc13P50207 328 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Tpm1P58771 284 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Serpina1cQ00896 412 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Serpina1dQ00897 413 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Epha7Q61772 998 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Secisbp2lQ6A098 1086 aaKnown RBP28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Rbm41Q8JZV4 413 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Rpap2Q8VC34 614 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 HlcsQ920N2 722 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Mis18aQ9CZJ6 204 aa28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Zcchc17Q9ESX4 241 aaKnown RBP28.61■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Gm45208A0A140LJ36 292 aa28.6■■■□□ 2.17
Tpm1-216ENSMUST00000113707 YdjcQ14BV6 310 aa28.6■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Ccdc84Q4VA36 332 aaKnown RBP28.6■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Cacnb1Q8R3Z5 597 aa28.6■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Gm10378F6XQQ1 160 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Cst8P32766 142 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Pbxip1Q3TVI8 727 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Nom1Q3UFM5 854 aaKnown RBP28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Dync1li2Q6PDL0 492 aaKnown RBP28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Rassf3Q99P51 232 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Npm3Q9CPP0 175 aaKnown RBP28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Tex21Q9R0U9 575 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Oip5A2AQ14 241 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Pla2g6P97819 807 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Necab1Q8BG18 352 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Med24Q99K74 987 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Mfap3lQ9D3X9 409 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Kcnh7Q9ER47 1195 aa28.59■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Gm4985A2ALC6 410 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Ccdc78D3Z5T1 437 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Ugt1a8D3Z748 530 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Ugt1a10E9PXN7 530 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Rbm46P86049 533 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Nlrp4cQ3TKR3 982 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Rasip1Q3U0S6 961 aa28.58■■■□□ 2.17
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms