RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Cep85lA0A1W2P884 806 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Ephb4P54761 987 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Ttll4Q80UG8 1193 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Catsper1Q91ZR5 686 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Trmt44Q9D2Q2 713 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Cyp3a57D3YYZ0 503 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Gm21962L7N280 338 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Eef2kO08796 724 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Q6PD19 689 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Hps6Q8BLY7 805 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Suds3Q8BR65 328 aa16.9■□□□□ 0.3
Ubr2-201ENSMUST00000113335 Plekhg1F6S200 1446 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 LtkP08923 888 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Fam47cQ14BE7 430 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Caprin1Q60865 707 aaKnown RBP16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Sec23ipQ6NZC7 998 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Brd2Q7JJ13 798 aaKnown RBP16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Nsmce1Q9D720 266 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Fmn2Q9JL04 1578 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Hic2Q9JLZ6 619 aaKnown RBP16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Mroh6V9GX81 722 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Abcc1O35379 1528 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Taf1bP97358 586 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Thumpd3P97770 505 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Hdac4Q6NZM9 1076 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Ppp1r14cQ8R4S0 164 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Unc13aQ4KUS2 1712 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Cyp11b2P15539 500 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 L3mbtl3Q8BLB7 883 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Pex19Q8VCI5 299 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Prpf3Q922U1 683 aaKnown RBP16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Dbndd2Q9CRD4 158 aa16.89■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Erbb4Q61527 1308 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Ube4aE9Q735 1028 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Usp53P15975 1069 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Atp8b1Q148W0 1251 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Llgl2Q3TJ91 1027 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Zfp317Q8C0Q5 607 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Ttll1Q91V51 423 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Grtp1Q9D3N8 359 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Caln1Q9JJG7 219 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Serpinb8O08800 374 aaKnown RBP16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 GnptabQ69ZN6 1235 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Mknk2Q8CDB0 459 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Ccdc92Q8VDN4 314 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Mcf2A2AEU1 1111 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Anks1aP59672 1150 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Git1Q68FF6 770 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 MarsQ68FL6 902 aaKnown RBP16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 AdalQ80SY6 360 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Cul1Q9WTX6 776 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Vti1aO89116 217 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 NpeppsQ11011 920 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Miga1Q4QQM5 600 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Cnpy3Q9DAU1 276 aa16.88■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Zc3h18Q0P678 948 aaKnown RBP16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Wdr36Q3TAQ9 899 aaKnown RBP16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Agap2Q3UHD9 1186 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Myo1cQ9WTI7 1063 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Gimap9G3X987 291 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Hspa1lP16627 641 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 EsrrgP62509 458 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Rgl1Q60695 768 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Ankrd13aQ80UP5 588 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Lyve1Q8BHC0 318 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Ints9Q8K114 658 aaKnown RBP16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Arl2bpQ9D385 163 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Mettl17Q3U2U7 461 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Fndc3aQ8BX90 1198 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Prpsap2Q8R574 369 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Gfpt1P47856 697 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Atg16l1Q8C0J2 607 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Thoc1Q8R3N6 657 aaKnown RBP16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Usp15Q8R5H1 981 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Eaf2Q91ZD6 262 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Psma8Q9CWH6 250 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Cyth2P63034 400 aaKnown RBP16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Sult1d1Q3UZZ6 295 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Chmp2aQ9DB34 222 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Ptch1Q61115 1434 aa16.87■□□□□ 0.29
Ubr2-201ENSMUST00000113335 EsrraO08580 422 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 DffaO54786 331 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Pde6bP23440 856 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Pla2g4aP47713 748 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 LrmpQ60664 539 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Trim56Q80VI1 734 aaKnown RBP16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Dpp7Q9ET22 506 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Kif9Q9WV04 790 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 ThrspQ62264 150 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Ckap2lQ7TS74 745 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Q8CEZ4 452 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Slc39a2G3X943 309 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Tfdp1Q08639 410 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Sorbs1Q62417 1290 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 6820408C15RikQ8BJX2 354 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Plcg2Q8CIH5 1265 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Psmd2Q8VDM4 908 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Spats2lQ91WJ7 558 aaKnown RBP16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Cap2Q9CYT6 476 aa16.86■□□□□ 0.29
Ubr2-201ENSMUST00000113335 Col1a2Q01149 1372 aa16.86■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms