RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 PHO92Q06390 306 aa-1.98□□□□□ -2.73
snR40snR40 CRN1Q06440 651 aa-1.98□□□□□ -2.73
snR40snR40 HIM1Q06674 414 aa-1.98□□□□□ -2.73
snR40snR40 CMS1Q07897 291 aaKnown RBP-1.98□□□□□ -2.73
snR40snR40 RPS10AQ08745 105 aaPredicted RBP-1.98□□□□□ -2.73
snR40snR40 CKA2P19454 339 aa-1.99□□□□□ -2.73
snR40snR40 RPB5P20434 215 aa-1.99□□□□□ -2.73
snR40snR40 XRS2P33301 854 aa-1.99□□□□□ -2.73
snR40snR40 ECM34P38728 170 aa-1.99□□□□□ -2.73
snR40snR40 SHC1P39000 512 aa-1.99□□□□□ -2.73
snR40snR40 VHT1P53241 593 aa-1.99□□□□□ -2.73
snR40snR40 SHR3Q02774 210 aa-1.99□□□□□ -2.73
snR40snR40 STD1Q02794 444 aa-1.99□□□□□ -2.73
snR40snR40 YPL108WQ02872 168 aaPredicted RBP-1.99□□□□□ -2.73
snR40snR40 MRP51Q02950 344 aa-1.99□□□□□ -2.73
snR40snR40 TRI1Q05024 226 aa-1.99□□□□□ -2.73
snR40snR40 ATG9Q12142 997 aa-1.99□□□□□ -2.73
snR40snR40 DBP10Q12389 995 aaKnown RBP-1.99□□□□□ -2.73
snR40snR40 RSM22P36056 628 aa-2□□□□□ -2.73
snR40snR40 TAF5P38129 798 aa-2□□□□□ -2.73
snR40snR40 DBP8P38719 431 aa-2□□□□□ -2.73
snR40snR40 CKB2P38930 258 aa-2□□□□□ -2.73
snR40snR40 MST28P39552 234 aa-2□□□□□ -2.73
snR40snR40 SSP120P39931 234 aaKnown RBP-2□□□□□ -2.73
snR40snR40 LAM5P43560 674 aa-2□□□□□ -2.73
snR40snR40 RTS3P53289 263 aa-2□□□□□ -2.73
snR40snR40 IST1P53843 298 aaPredicted RBP-2□□□□□ -2.73
snR40snR40 YNL095CP53932 642 aa-2□□□□□ -2.73
snR40snR40 YML131WQ03102 365 aa-2□□□□□ -2.73
snR40snR40 EMI2Q04409 500 aaKnown RBP-2□□□□□ -2.73
snR40snR40 RIF2Q06208 395 aa-2□□□□□ -2.73
snR40snR40 HPR1P17629 752 aaKnown RBP-2.01□□□□□ -2.73
snR40snR40 CMK2P22517 447 aa-2.01□□□□□ -2.73
snR40snR40 SNT1P25357 1226 aa-2.01□□□□□ -2.73
snR40snR40 MUD1P32605 298 aaKnown RBP-2.01□□□□□ -2.73
snR40snR40 YEF1P32622 495 aa-2.01□□□□□ -2.73
snR40snR40 YKL050CP35736 922 aa-2.01□□□□□ -2.73
snR40snR40 YKR045CP36138 183 aa-2.01□□□□□ -2.73
snR40snR40 SMC2P38989 1170 aaKnown RBP-2.01□□□□□ -2.73
snR40snR40 RBG1P39729 369 aa-2.01□□□□□ -2.73
snR40snR40 GLE2P40066 365 aa-2.01□□□□□ -2.73
snR40snR40 RNR4P49723 345 aaKnown RBP-2.01□□□□□ -2.73
snR40snR40 GPI1P53306 609 aa-2.01□□□□□ -2.73
snR40snR40 MTQ1P53944 314 aa-2.01□□□□□ -2.73
snR40snR40 MRD1Q06106 887 aaKnown RBP-2.01□□□□□ -2.73
snR40snR40 PEX15Q08215 383 aa-2.01□□□□□ -2.73
snR40snR40 ICL2Q12031 575 aa-2.01□□□□□ -2.73
snR40snR40 MCT1Q12283 360 aa-2.01□□□□□ -2.73
snR40snR40 CEX1Q12453 761 aa-2.01□□□□□ -2.73
snR40snR40 ERR1P0CX10 437 aa-2.02□□□□□ -2.73
snR40snR40 ERR2P0CX11 437 aa-2.02□□□□□ -2.73
snR40snR40 MSI1P13712 422 aa-2.02□□□□□ -2.73
snR40snR40 SCO1P23833 295 aa-2.02□□□□□ -2.73
snR40snR40 DEP1P31385 405 aa-2.02□□□□□ -2.73
snR40snR40 GEX2P36173 615 aa-2.02□□□□□ -2.73
snR40snR40 DUG3P53871 357 aa-2.02□□□□□ -2.73
snR40snR40 YMR181CQ03231 154 aa-2.02□□□□□ -2.73
snR40snR40 YMR018WQ04364 514 aa-2.02□□□□□ -2.73
snR40snR40 JIP5Q06214 492 aaPredicted RBP-2.02□□□□□ -2.73
snR40snR40 RPB2P08518 1224 aaKnown RBP-2.03□□□□□ -2.73
snR40snR40 YCR100CP25606 316 aa-2.03□□□□□ -2.73
snR40snR40 NPR3P38742 1146 aa-2.03□□□□□ -2.73
snR40snR40 PEX22P39718 180 aa-2.03□□□□□ -2.73
snR40snR40 YER010CP40011 234 aa-2.03□□□□□ -2.73
snR40snR40 YER084WP40057 128 aa-2.03□□□□□ -2.73
snR40snR40 EGT2P42835 1041 aa-2.03□□□□□ -2.73
snR40snR40 RHO5P53879 331 aaKnown RBP-2.03□□□□□ -2.73
snR40snR40 RSM23Q01163 450 aa-2.03□□□□□ -2.73
snR40snR40 EBS1Q03466 884 aaKnown RBP-2.03□□□□□ -2.73
snR40snR40 SYF1Q04048 859 aaPredicted RBP-2.03□□□□□ -2.73
snR40snR40 MSC3Q05812 728 aa-2.03□□□□□ -2.73
snR40snR40 CRD1Q07560 283 aa-2.03□□□□□ -2.73
snR40snR40 RIX7Q07844 837 aaKnown RBP-2.03□□□□□ -2.73
snR40snR40 DAL81P21657 970 aa-2.04□□□□□ -2.74
snR40snR40 PRD1P25375 712 aa-2.04□□□□□ -2.74
snR40snR40 ANR2P36090 516 aaPredicted RBP-2.04□□□□□ -2.74
snR40snR40 YKL023WP36103 277 aaKnown RBP-2.04□□□□□ -2.74
snR40snR40 SMP1P38128 452 aa-2.04□□□□□ -2.74
snR40snR40 TSC10P38342 320 aa-2.04□□□□□ -2.74
snR40snR40 PTI1P39927 425 aaPredicted RBP-2.04□□□□□ -2.74
snR40snR40 MGS1P40151 587 aa-2.04□□□□□ -2.74
snR40snR40 SSM4P40318 1319 aa-2.04□□□□□ -2.74
snR40snR40 BUD13P46947 266 aaPredicted RBP-2.04□□□□□ -2.74
snR40snR40 YJR096WP47137 282 aa-2.04□□□□□ -2.74
snR40snR40 SSN8P47821 323 aa-2.04□□□□□ -2.74
snR40snR40 HUL5P53119 910 aa-2.04□□□□□ -2.74
snR40snR40 DRN1P53255 507 aaKnown RBP-2.04□□□□□ -2.74
snR40snR40 SNX3Q08826 162 aaKnown RBP-2.04□□□□□ -2.74
snR40snR40 FEX1Q08913 375 aa-2.04□□□□□ -2.74
snR40snR40 FEX2Q08991 375 aa-2.04□□□□□ -2.74
snR40snR40 VPS68Q12016 184 aa-2.04□□□□□ -2.74
snR40snR40 AVL9Q12500 764 aa-2.04□□□□□ -2.74
snR40snR40 HXK2P04807 486 aaKnown RBP-2.05□□□□□ -2.74
snR40snR40 SPE2P21182 396 aa-2.05□□□□□ -2.74
snR40snR40 SER1P33330 395 aaKnown RBP-2.05□□□□□ -2.74
snR40snR40 SNU114P36048 1008 aaKnown RBP-2.05□□□□□ -2.74
snR40snR40 DBP7P36120 742 aaKnown RBP-2.05□□□□□ -2.74
snR40snR40 CCT6P39079 546 aa-2.05□□□□□ -2.74
snR40snR40 VEL1P53058 206 aa-2.05□□□□□ -2.74
snR40snR40 ARE2P53629 642 aaKnown RBP-2.05□□□□□ -2.74
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms