RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeastyeast

Gene IRC16, Length 360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC16YPR038W PNG1Q02890 363 aa2.42□□□□□ -2.02
IRC16YPR038W PDS5Q04264 1277 aa2.42□□□□□ -2.02
IRC16YPR038W MFB1Q04922 465 aa2.42□□□□□ -2.02
IRC16YPR038W MUM3Q08750 479 aa2.42□□□□□ -2.02
IRC16YPR038W THP3Q12049 470 aaKnown RBP2.42□□□□□ -2.02
IRC16YPR038W RKM5Q12367 367 aa2.42□□□□□ -2.02
IRC16YPR038W RHO2P06781 192 aa2.41□□□□□ -2.02
IRC16YPR038W SPS22P25380 463 aa2.41□□□□□ -2.02
IRC16YPR038W YCR100CP25606 316 aa2.41□□□□□ -2.02
IRC16YPR038W YIM1P28625 365 aa2.41□□□□□ -2.02
IRC16YPR038W CST26P38226 397 aa2.41□□□□□ -2.02
IRC16YPR038W RFS1P38234 210 aaKnown RBP2.41□□□□□ -2.02
IRC16YPR038W ISC1P40015 477 aaKnown RBP2.41□□□□□ -2.02
IRC16YPR038W ART5P53244 586 aaKnown RBP2.41□□□□□ -2.02
IRC16YPR038W TWF1P53250 332 aa2.41□□□□□ -2.02
IRC16YPR038W NCS2P53923 493 aaPredicted RBP2.41□□□□□ -2.02
IRC16YPR038W MRP51Q02950 344 aa2.41□□□□□ -2.02
IRC16YPR038W RPC11Q04307 110 aaPredicted RBP2.41□□□□□ -2.02
IRC16YPR038W RRG7Q08774 242 aaPredicted RBP2.41□□□□□ -2.02
IRC16YPR038W YPL199CQ08954 240 aa2.41□□□□□ -2.02
IRC16YPR038W CHS1P08004 1131 aa2.4□□□□□ -2.03
IRC16YPR038W ISY1P21374 235 aaPredicted RBP2.4□□□□□ -2.03
IRC16YPR038W CPR4P25334 318 aa2.4□□□□□ -2.03
IRC16YPR038W HXT1P32465 570 aa2.4□□□□□ -2.03
IRC16YPR038W MIX23P38162 196 aa2.4□□□□□ -2.03
IRC16YPR038W PTH1P38876 190 aaKnown RBP2.4□□□□□ -2.03
IRC16YPR038W YDR239CQ03780 787 aa2.4□□□□□ -2.03
IRC16YPR038W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
IRC16YPR038W BSC6Q08280 497 aa2.4□□□□□ -2.03
IRC16YPR038W TMS1Q12116 473 aa2.4□□□□□ -2.03
IRC16YPR038W RAD14P28519 371 aa2.39□□□□□ -2.03
IRC16YPR038W IMP2'P32351 346 aa2.39□□□□□ -2.03
IRC16YPR038W STB6P36085 766 aa2.39□□□□□ -2.03
IRC16YPR038W SRO77P38163 1010 aa2.39□□□□□ -2.03
IRC16YPR038W DOT5P40553 215 aa2.39□□□□□ -2.03
IRC16YPR038W YGL108CP53139 140 aa2.39□□□□□ -2.03
IRC16YPR038W RMD9P53140 646 aaKnown RBP2.39□□□□□ -2.03
IRC16YPR038W TOF1P53840 1238 aa2.39□□□□□ -2.03
IRC16YPR038W RPT6Q01939 405 aaKnown RBP2.39□□□□□ -2.03
IRC16YPR038W GIR2Q03768 265 aaPredicted RBP2.39□□□□□ -2.03
IRC16YPR038W MHR1Q06630 226 aa2.39□□□□□ -2.03
IRC16YPR038W TSR1Q07381 788 aaKnown RBP2.39□□□□□ -2.03
IRC16YPR038W PET123P17558 318 aa2.38□□□□□ -2.03
IRC16YPR038W SPR1P32603 445 aa2.38□□□□□ -2.03
IRC16YPR038W SEC66P33754 206 aa2.38□□□□□ -2.03
IRC16YPR038W CMC1P36064 111 aa2.38□□□□□ -2.03
IRC16YPR038W VID24P38263 362 aa2.38□□□□□ -2.03
IRC16YPR038W YBR225WP38321 900 aa2.38□□□□□ -2.03
IRC16YPR038W UTP9P38882 575 aaKnown RBP2.38□□□□□ -2.03
IRC16YPR038W WWM1P43582 211 aaKnown RBP2.38□□□□□ -2.03
IRC16YPR038W GOR1P53839 350 aa2.38□□□□□ -2.03
IRC16YPR038W HER2Q03557 464 aa2.38□□□□□ -2.03
IRC16YPR038W ATG29Q12092 213 aa2.38□□□□□ -2.03
IRC16YPR038W HRT3Q12347 344 aa2.38□□□□□ -2.03
IRC16YPR038W YML133CQ03099 1374 aa2.37□□□□□ -2.03
IRC16YPR038W YLL067CQ07888 1374 aa2.37□□□□□ -2.03
IRC16YPR038W YLL066CQ99208 1374 aa2.37□□□□□ -2.03
IRC16YPR038W SAM1P10659 382 aaKnown RBP2.37□□□□□ -2.03
IRC16YPR038W SAM2P19358 384 aaKnown RBP2.37□□□□□ -2.03
IRC16YPR038W DAL2P25335 343 aa2.37□□□□□ -2.03
IRC16YPR038W MST28P39552 234 aa2.37□□□□□ -2.03
IRC16YPR038W YMR147WP40218 223 aaKnown RBP2.37□□□□□ -2.03
IRC16YPR038W PRM5P40476 318 aa2.37□□□□□ -2.03
IRC16YPR038W TFG2P41896 400 aaPredicted RBP2.37□□□□□ -2.03
IRC16YPR038W HXT14P42833 540 aa2.37□□□□□ -2.03
IRC16YPR038W TRS85P46944 698 aa2.37□□□□□ -2.03
IRC16YPR038W DSL1P53847 754 aa2.37□□□□□ -2.03
IRC16YPR038W YLR152CP54072 576 aa2.37□□□□□ -2.03
IRC16YPR038W YMR027WQ04371 470 aa2.37□□□□□ -2.03
IRC16YPR038W HRI1Q05905 244 aaKnown RBP2.37□□□□□ -2.03
IRC16YPR038W MRD1Q06106 887 aaKnown RBP2.37□□□□□ -2.03
IRC16YPR038W IMH1Q06704 911 aaKnown RBP2.37□□□□□ -2.03
IRC16YPR038W TMC1Q08422 150 aaPredicted RBP2.37□□□□□ -2.03
IRC16YPR038W PKH2Q12236 1081 aaKnown RBP2.37□□□□□ -2.03
IRC16YPR038W RAD61Q99359 647 aa2.37□□□□□ -2.03
IRC16YPR038W SPS4P09937 338 aa2.36□□□□□ -2.03
IRC16YPR038W CLN3P13365 580 aa2.36□□□□□ -2.03
IRC16YPR038W ATP10P18496 279 aa2.36□□□□□ -2.03
IRC16YPR038W RVS161P25343 265 aaKnown RBP2.36□□□□□ -2.03
IRC16YPR038W SPB1P25582 841 aaPredicted RBP2.36□□□□□ -2.03
IRC16YPR038W TIP1P27654 210 aaPredicted RBP2.36□□□□□ -2.03
IRC16YPR038W AFG1P32317 509 aa2.36□□□□□ -2.03
IRC16YPR038W PRS1P32895 427 aaKnown RBP2.36□□□□□ -2.03
IRC16YPR038W YCR041WP37265 110 aa2.36□□□□□ -2.03
IRC16YPR038W SWD3P38123 315 aa2.36□□□□□ -2.03
IRC16YPR038W MTC6P38849 526 aa2.36□□□□□ -2.03
IRC16YPR038W KEL1P38853 1164 aaKnown RBP2.36□□□□□ -2.03
IRC16YPR038W YEL057CP39983 233 aa2.36□□□□□ -2.03
IRC16YPR038W ARF3P40994 183 aaRIP-Chip data2.36□□□□□ -2.03not detected
IRC16YPR038W OST1P41543 476 aaKnown RBP2.36□□□□□ -2.03
IRC16YPR038W LAM5P43560 674 aa2.36□□□□□ -2.03
IRC16YPR038W ECM27P47144 725 aa2.36□□□□□ -2.03
IRC16YPR038W YGR149WP48236 432 aa2.36□□□□□ -2.03
IRC16YPR038W YIP1P53039 248 aa2.36□□□□□ -2.03
IRC16YPR038W ARE2P53629 642 aaKnown RBP2.36□□□□□ -2.03
IRC16YPR038W YMR181CQ03231 154 aa2.36□□□□□ -2.03
IRC16YPR038W TAP42Q04372 366 aa2.36□□□□□ -2.03
IRC16YPR038W MRPL35Q06678 367 aa2.36□□□□□ -2.03
IRC16YPR038W HIS4P00815 799 aaKnown RBP2.35□□□□□ -2.03
IRC16YPR038W CDC60P26637 1090 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 128.5 ms