RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	PHO91	P27514	894 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	NIP1	P32497	812 aa	Known RBP	4.28	□□□□□ -1.72
CMR3	YPR013C	PRP21	P32524	280 aa	Predicted RBP	4.28	□□□□□ -1.72
CMR3	YPR013C	EFM2	P38347	419 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	RFC3	P38629	340 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	EFM3	P47163	339 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	YJR154W	P47181	346 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	PIB2	P53191	635 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	BUD32	P53323	261 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	ARP5	P53946	755 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	FMP30	Q02883	468 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	YDR541C	Q03049	344 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	RBA50	Q04418	439 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	MDM30	Q05930	598 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	SRN2	Q99176	213 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	INO80	P53115	1489 aa		4.28	□□□□□ -1.72
CMR3	YPR013C	YPR089W	O13585	888 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	SCEI	P03882	235 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	ILV5	P06168	395 aa	Known RBP	4.27	□□□□□ -1.73
CMR3	YPR013C	SEC63	P14906	663 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	ALG1	P16661	449 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	RDS1	P25611	832 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	FUN19	P28003	413 aa	Predicted RBP	4.27	□□□□□ -1.73
CMR3	YPR013C	SNC1	P31109	117 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	ATP11	P32453	318 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	RIB7	P33312	244 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	RRN10	P38204	145 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	PCA1	P38360	1216 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	VPS41	P38959	992 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	PHO90	P39535	881 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	SYG1	P40528	902 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	HXT9	P40885	567 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	ELP2	P42935	788 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	IRC7	P43623	340 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	ASN2	P49090	572 aa	Known RBP	4.27	□□□□□ -1.73
CMR3	YPR013C	YIP5	P53108	310 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	SOL4	P53315	255 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	PRM1	P53835	661 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	KTR5	P53966	522 aa	Predicted RBP	4.27	□□□□□ -1.73
CMR3	YPR013C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
CMR3	YPR013C	RRB1	Q04225	511 aa	Known RBP	4.27	□□□□□ -1.73
CMR3	YPR013C	YMR111C	Q04461	462 aa	Predicted RBP	4.27	□□□□□ -1.73
CMR3	YPR013C	MCP2	Q06567	569 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	YDL218W	Q07629	317 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
CMR3	YPR013C	BUG1	Q12191	341 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	RRD2	Q12461	358 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	RRP36	Q12481	300 aa	Predicted RBP	4.27	□□□□□ -1.73
CMR3	YPR013C	YLR111W	Q12528	110 aa		4.27	□□□□□ -1.73
CMR3	YPR013C	COX3	P00420	269 aa		4.26	□□□□□ -1.73
CMR3	YPR013C	ADE4	P04046	510 aa	Known RBP	4.26	□□□□□ -1.73
CMR3	YPR013C	LEU4	P06208	619 aa	Known RBP	4.26	□□□□□ -1.73
CMR3	YPR013C	STE3	P06783	470 aa		4.26	□□□□□ -1.73
CMR3	YPR013C	GRR1	P24814	1151 aa		4.26	□□□□□ -1.73
CMR3	YPR013C	HSP104	P31539	908 aa	Known RBP	4.26	□□□□□ -1.73
CMR3	YPR013C	PPQ1	P32945	549 aa		4.26	□□□□□ -1.73
CMR3	YPR013C	EBP2	P36049	427 aa	Known RBP	4.26	□□□□□ -1.73
CMR3	YPR013C	NMD5	P46970	1048 aa		4.26	□□□□□ -1.73
CMR3	YPR013C	YJR011C	P47086	261 aa	Predicted RBP	4.26	□□□□□ -1.73
CMR3	YPR013C	PKP2	P53170	491 aa		4.26	□□□□□ -1.73
CMR3	YPR013C	UTP6	Q02354	440 aa	Known RBP	4.26	□□□□□ -1.73
CMR3	YPR013C	HSP31	Q04432	237 aa		4.26	□□□□□ -1.73
CMR3	YPR013C	SSK1	Q07084	712 aa		4.26	□□□□□ -1.73
CMR3	YPR013C	SUC2	P00724	532 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	MES1	P00958	751 aa	Known RBP	4.25	□□□□□ -1.73
CMR3	YPR013C	SCH9	P11792	824 aa	Known RBP	4.25	□□□□□ -1.73
CMR3	YPR013C	OM45	P16547	393 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	SOR1	P35497	357 aa	Known RBP	4.25	□□□□□ -1.73
CMR3	YPR013C	CCT2	P39076	527 aa	Known RBP	4.25	□□□□□ -1.73
CMR3	YPR013C	VRG4	P40107	337 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	SAS2	P40963	338 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	BPL1	P48445	690 aa	Predicted RBP	4.25	□□□□□ -1.73
CMR3	YPR013C	ROG1	P53118	685 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	RHO4	Q00246	291 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	YPL014W	Q02606	381 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	SOR2	Q07786	357 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	IRC10	Q08118	586 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	PFA4	Q12006	378 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	RUP1	Q12242	671 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	EDE1	P34216	1381 aa		4.25	□□□□□ -1.73
CMR3	YPR013C	ERG11	P10614	530 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	BAR1	P12630	587 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	DBP3	P20447	523 aa	Known RBP	4.24	□□□□□ -1.73
CMR3	YPR013C	ECM25	P32525	599 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	HOT13	P36078	116 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	MRPL40	P36534	297 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	KAP104	P38217	918 aa	Known RBP	4.24	□□□□□ -1.73
CMR3	YPR013C	SPC97	P38863	823 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	MNL1	P38888	796 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	STN1	P38960	494 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	PCF11	P39081	626 aa	Predicted RBP	4.24	□□□□□ -1.73
CMR3	YPR013C	MKT1	P40850	830 aa	Known RBP	4.24	□□□□□ -1.73
CMR3	YPR013C	TAX4	P47030	604 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	DSL1	P53847	754 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	CTL1	Q03220	320 aa	Known RBP	4.24	□□□□□ -1.73
CMR3	YPR013C	IPK1	Q06667	281 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	NDJ1	Q12366	352 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	RRI1	Q12468	440 aa		4.24	□□□□□ -1.73
CMR3	YPR013C	PFK27	Q12471	397 aa	Predicted RBP	4.24	□□□□□ -1.73
CMR3	YPR013C	SFG1	Q12507	346 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms