RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C LEU9Q12166 604 aaKnown RBP6.89□□□□□ -1.31
UME1YPL139C RPS27AP35997 82 aaKnown RBP6.88□□□□□ -1.31
UME1YPL139C MUD2P36084 527 aaKnown RBP6.88□□□□□ -1.31
UME1YPL139C MRPL15P36523 253 aa6.88□□□□□ -1.31
UME1YPL139C YRO2P38079 344 aa6.88□□□□□ -1.31
UME1YPL139C CTP1P38152 299 aa6.88□□□□□ -1.31
UME1YPL139C RPS27BP38711 82 aa6.88□□□□□ -1.31
UME1YPL139C SEC31P38968 1273 aaKnown RBP6.88□□□□□ -1.31
UME1YPL139C FAR3P46671 204 aa6.88□□□□□ -1.31
UME1YPL139C BIO3P50277 480 aa6.88□□□□□ -1.31
UME1YPL139C ROG1P53118 685 aa6.88□□□□□ -1.31
UME1YPL139C YNL058CP53947 316 aa6.88□□□□□ -1.31
UME1YPL139C PEX25Q02969 394 aa6.88□□□□□ -1.31
UME1YPL139C RSM10Q03201 203 aa6.88□□□□□ -1.31
UME1YPL139C AHA1Q12449 350 aaKnown RBP6.88□□□□□ -1.31
UME1YPL139C SPE4Q12455 300 aa6.88□□□□□ -1.31
UME1YPL139C YKL068W-AQ3E826 78 aa6.88□□□□□ -1.31
UME1YPL139C HSC82P15108 705 aaKnown RBP6.87□□□□□ -1.31
UME1YPL139C URA4P20051 364 aa6.87□□□□□ -1.31
UME1YPL139C SGV1P23293 657 aaKnown RBP6.87□□□□□ -1.31
UME1YPL139C YCR051WP25631 222 aa6.87□□□□□ -1.31
UME1YPL139C FUN30P31380 1131 aa6.87□□□□□ -1.31
UME1YPL139C ERG1P32476 496 aaKnown RBP6.87□□□□□ -1.31
UME1YPL139C RPS1AP33442 255 aaKnown RBP6.87□□□□□ -1.31
UME1YPL139C CAB3P36076 571 aa6.87□□□□□ -1.31
UME1YPL139C APT2P36973 181 aa6.87□□□□□ -1.31
UME1YPL139C YER034WP40022 185 aaKnown RBP6.87□□□□□ -1.31
UME1YPL139C IKS1P47042 667 aa6.87□□□□□ -1.31
UME1YPL139C RCF2P53721 224 aa6.87□□□□□ -1.31
UME1YPL139C YPL066WQ12194 479 aa6.87□□□□□ -1.31
UME1YPL139C AI3P03877 415 aa6.86□□□□□ -1.31
UME1YPL139C COS2P0CX12 379 aa6.86□□□□□ -1.31
UME1YPL139C COS3P0CX13 379 aa6.86□□□□□ -1.31
UME1YPL139C CDC5P32562 705 aa6.86□□□□□ -1.31
UME1YPL139C SUI1P32911 108 aaKnown RBP6.86□□□□□ -1.31
UME1YPL139C BMT2P38278 337 aa6.86□□□□□ -1.31
UME1YPL139C MTG2P38860 518 aa6.86□□□□□ -1.31
UME1YPL139C FAU1P40099 211 aa6.86□□□□□ -1.31
UME1YPL139C RPL10P41805 221 aaKnown RBP6.86□□□□□ -1.31
UME1YPL139C COS4P43542 379 aa6.86□□□□□ -1.31
UME1YPL139C ALG12P53730 551 aa6.86□□□□□ -1.31
UME1YPL139C MSC1Q03104 513 aa6.86□□□□□ -1.31
UME1YPL139C DFG5Q05031 458 aa6.86□□□□□ -1.31
UME1YPL139C XYL2Q07993 356 aa6.86□□□□□ -1.31
UME1YPL139C BDS1Q08347 646 aa6.86□□□□□ -1.31
UME1YPL139C VHS3Q08438 674 aa6.86□□□□□ -1.31
UME1YPL139C SLF1Q12034 447 aaKnown RBP6.86□□□□□ -1.31
UME1YPL139C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
UME1YPL139C NCA2Q12374 616 aa6.86□□□□□ -1.31
UME1YPL139C YPR064WQ12492 139 aa6.86□□□□□ -1.31
UME1YPL139C YCL012CQ8J0M4 134 aa6.86□□□□□ -1.31
UME1YPL139C HXK2P04807 486 aaKnown RBP6.85□□□□□ -1.31
UME1YPL139C NMT1P14743 455 aa6.85□□□□□ -1.31
UME1YPL139C BAS1P22035 811 aa6.85□□□□□ -1.31
UME1YPL139C OCA4P25366 362 aa6.85□□□□□ -1.31
UME1YPL139C LDB16P25587 256 aa6.85□□□□□ -1.31
UME1YPL139C BUB2P26448 306 aaPredicted RBP6.85□□□□□ -1.31
UME1YPL139C IDH2P28241 369 aaKnown RBP6.85□□□□□ -1.31
UME1YPL139C UGP1P32861 499 aaKnown RBP6.85□□□□□ -1.31
UME1YPL139C YBR071WP38243 211 aa6.85□□□□□ -1.31
UME1YPL139C MET18P40469 1032 aa6.85□□□□□ -1.31
UME1YPL139C NEO1P40527 1151 aa6.85□□□□□ -1.31
UME1YPL139C MEP2P41948 499 aa6.85□□□□□ -1.31
UME1YPL139C PRM10P42946 383 aa6.85□□□□□ -1.31
UME1YPL139C TEL2P53038 688 aa6.85□□□□□ -1.31
UME1YPL139C ERG13P54839 491 aaKnown RBP6.85□□□□□ -1.31
UME1YPL139C TVP15Q03860 143 aa6.85□□□□□ -1.31
UME1YPL139C GLO2Q05584 274 aa6.85□□□□□ -1.31
UME1YPL139C PDR8Q06149 701 aa6.85□□□□□ -1.31
UME1YPL139C RRP15Q06511 250 aaPredicted RBP6.85□□□□□ -1.31
UME1YPL139C YOL159CQ08300 171 aa6.85□□□□□ -1.31
UME1YPL139C RUP1Q12242 671 aa6.85□□□□□ -1.31
UME1YPL139C HSP42Q12329 375 aa6.85□□□□□ -1.31
UME1YPL139C VPS33P20795 691 aa6.84□□□□□ -1.31
UME1YPL139C TAH1P25638 111 aaPredicted RBP6.84□□□□□ -1.31
UME1YPL139C FAA1P30624 700 aaKnown RBP6.84□□□□□ -1.31
UME1YPL139C SRB5P32585 307 aa6.84□□□□□ -1.31
UME1YPL139C ATG7P38862 630 aa6.84□□□□□ -1.31
UME1YPL139C GTR2P53290 341 aa6.84□□□□□ -1.31
UME1YPL139C SLM2P53955 656 aa6.84□□□□□ -1.31
UME1YPL139C MET31Q03081 177 aa6.84□□□□□ -1.31
UME1YPL139C RSF1Q05043 376 aa6.84□□□□□ -1.31
UME1YPL139C REX4Q08237 289 aa6.84□□□□□ -1.31
UME1YPL139C MCA1Q08601 432 aa6.84□□□□□ -1.31
UME1YPL139C FAS1P07149 2051 aaKnown RBP6.84□□□□□ -1.31
UME1YPL139C COX1P00401 534 aa6.83□□□□□ -1.32
UME1YPL139C TRP3P00937 484 aa6.83□□□□□ -1.32
UME1YPL139C MGR1P25573 417 aa6.83□□□□□ -1.32
UME1YPL139C NIP1P32497 812 aaKnown RBP6.83□□□□□ -1.32
UME1YPL139C STE14P32584 239 aa6.83□□□□□ -1.32
UME1YPL139C PTC1P35182 281 aa6.83□□□□□ -1.32
UME1YPL139C MDJ1P35191 511 aa6.83□□□□□ -1.32
UME1YPL139C BNA4P38169 460 aa6.83□□□□□ -1.32
UME1YPL139C YHR112CP38716 378 aa6.83□□□□□ -1.32
UME1YPL139C FMP52P40008 231 aa6.83□□□□□ -1.32
UME1YPL139C ARB1P40024 610 aaKnown RBP6.83□□□□□ -1.32
UME1YPL139C PAC11P40960 533 aa6.83□□□□□ -1.32
UME1YPL139C BAP3P41815 604 aa6.83□□□□□ -1.32
UME1YPL139C MET12P46151 657 aa6.83□□□□□ -1.32
UME1YPL139C STE24P47154 453 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms