RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	SMC3	P47037	1230 aa		3.03	□□□□□ -1.92
ATG3	YNR007C	YNL146W	P53906	100 aa		3.03	□□□□□ -1.92
ATG3	YNR007C	MFB1	Q04922	465 aa		3.03	□□□□□ -1.92
ATG3	YNR007C	NSE1	Q07913	336 aa		3.03	□□□□□ -1.92
ATG3	YNR007C	RLP24	Q07915	199 aa	Known RBP	3.03	□□□□□ -1.92
ATG3	YNR007C	YDR056C	Q12025	205 aa		3.03	□□□□□ -1.92
ATG3	YNR007C	YPL150W	Q12152	901 aa		3.03	□□□□□ -1.92
ATG3	YNR007C	MED1	Q12321	566 aa		3.03	□□□□□ -1.92
ATG3	YNR007C	RRD2	Q12461	358 aa		3.03	□□□□□ -1.92
ATG3	YNR007C	HIS4	P00815	799 aa	Known RBP	3.02	□□□□□ -1.93
ATG3	YNR007C	GAL80	P04387	435 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	HXK2	P04807	486 aa	Known RBP	3.02	□□□□□ -1.93
ATG3	YNR007C	GPA1	P08539	472 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	MTF1	P14908	341 aa	Known RBP	3.02	□□□□□ -1.93
ATG3	YNR007C	PGS1	P25578	521 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	PDB1	P32473	366 aa	Known RBP	3.02	□□□□□ -1.93
ATG3	YNR007C	YOX1	P34161	385 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	HEL1	P36113	551 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	ALY1	P36117	915 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	RFS1	P38234	210 aa	Known RBP	3.02	□□□□□ -1.93
ATG3	YNR007C	SDS24	P38314	527 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	YHR054C	P38780	354 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	UIP3	P39547	235 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	PKP1	P40530	394 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	SWP82	P43554	623 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	MNP1	P53163	194 aa	Predicted RBP	3.02	□□□□□ -1.93
ATG3	YNR007C	CRZ1	P53968	678 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	ADA2	Q02336	434 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	RSM28	Q03430	361 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	YKU80	Q04437	629 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	DON1	Q05610	365 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	PLP2	Q12017	286 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	YOR019W	Q99248	730 aa		3.02	□□□□□ -1.93
ATG3	YNR007C	HNM1	P19807	563 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	SEC1	P30619	724 aa	Known RBP	3.01	□□□□□ -1.93
ATG3	YNR007C	YKT6	P36015	200 aa	Known RBP	3.01	□□□□□ -1.93
ATG3	YNR007C	AGP2	P38090	596 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	RFT1	P38206	574 aa	Predicted RBP	3.01	□□□□□ -1.93
ATG3	YNR007C	DIA4	P38705	446 aa	Predicted RBP	3.01	□□□□□ -1.93
ATG3	YNR007C	DHH1	P39517	506 aa	Known RBP	3.01	□□□□□ -1.93
ATG3	YNR007C	ECM10	P39987	644 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	YER186C	P40101	306 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	CTK2	P46962	323 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	YNR061C	P53747	219 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	YNL181W	P53878	407 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	INN1	P53901	409 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	RPA49	Q01080	415 aa	Predicted RBP	3.01	□□□□□ -1.93
ATG3	YNR007C	PNG1	Q02890	363 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	GIR2	Q03768	265 aa	Predicted RBP	3.01	□□□□□ -1.93
ATG3	YNR007C	YLR049C	Q12110	428 aa		3.01	□□□□□ -1.93
ATG3	YNR007C	NOP58	Q12499	511 aa	Known RBP	3.01	□□□□□ -1.93
ATG3	YNR007C	OM45	P16547	393 aa		3	□□□□□ -1.93
ATG3	YNR007C	ISY1	P21374	235 aa	Predicted RBP	3	□□□□□ -1.93
ATG3	YNR007C	SGF29	P25554	259 aa		3	□□□□□ -1.93
ATG3	YNR007C	PEX34	P25584	144 aa		3	□□□□□ -1.93
ATG3	YNR007C	GAC1	P28006	793 aa		3	□□□□□ -1.93
ATG3	YNR007C	PRR1	P28708	518 aa		3	□□□□□ -1.93
ATG3	YNR007C	RPN12	P32496	274 aa		3	□□□□□ -1.93
ATG3	YNR007C	PRX1	P34227	261 aa	Known RBP	3	□□□□□ -1.93
ATG3	YNR007C	MUD2	P36084	527 aa	Known RBP	3	□□□□□ -1.93
ATG3	YNR007C	ADE17	P38009	592 aa	Known RBP	3	□□□□□ -1.93
ATG3	YNR007C	YBR139W	P38109	508 aa		3	□□□□□ -1.93
ATG3	YNR007C	MAL33	P38157	468 aa		3	□□□□□ -1.93
ATG3	YNR007C	YBL029W	P38201	376 aa		3	□□□□□ -1.93
ATG3	YNR007C	ATG12	P38316	186 aa		3	□□□□□ -1.93
ATG3	YNR007C	LEU5	P38702	357 aa		3	□□□□□ -1.93
ATG3	YNR007C	YEL068C	P39977	110 aa		3	□□□□□ -1.93
ATG3	YNR007C	YJL070C	P40361	888 aa		3	□□□□□ -1.93
ATG3	YNR007C	RSM25	P40496	264 aa		3	□□□□□ -1.93
ATG3	YNR007C	DPB11	P47027	764 aa	Predicted RBP	3	□□□□□ -1.93
ATG3	YNR007C	YJR054W	P47114	497 aa		3	□□□□□ -1.93
ATG3	YNR007C	NUP84	P52891	726 aa		3	□□□□□ -1.93
ATG3	YNR007C	TOF1	P53840	1238 aa		3	□□□□□ -1.93
ATG3	YNR007C	YSA1	Q01976	231 aa		3	□□□□□ -1.93
ATG3	YNR007C	TOF2	Q02208	771 aa		3	□□□□□ -1.93
ATG3	YNR007C	COG4	Q06096	861 aa		3	□□□□□ -1.93
ATG3	YNR007C	SHS1	Q07657	551 aa		3	□□□□□ -1.93
ATG3	YNR007C	PSR1	Q07800	427 aa		3	□□□□□ -1.93
ATG3	YNR007C	TCO89	Q08921	799 aa		3	□□□□□ -1.93
ATG3	YNR007C	HUA2	Q12134	243 aa		3	□□□□□ -1.93
ATG3	YNR007C	CTF3	Q12748	733 aa		3	□□□□□ -1.93
ATG3	YNR007C	YER145C-A	A0A023PYF4	145 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	ADE4	P04046	510 aa	Known RBP	2.99	□□□□□ -1.93
ATG3	YNR007C	ASP3-2	P0CX77	362 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	ASP3-3	P0CX78	362 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	ASP3-4	P0CX79	362 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	ASP3-1	P0CZ17	362 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	SAN1	P22470	610 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	ADH7	P25377	361 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	GPI10	P30777	616 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	SWI3	P32591	825 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	MUD1	P32605	298 aa	Known RBP	2.99	□□□□□ -1.93
ATG3	YNR007C	TKL2	P33315	681 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	COY1	P34237	679 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	FLC2	P39719	783 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	SEC24	P40482	926 aa	Known RBP	2.99	□□□□□ -1.93
ATG3	YNR007C	YIR014W	P40570	242 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	ATG27	P46989	271 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	UPF3	P48412	387 aa	Known RBP	2.99	□□□□□ -1.93
ATG3	YNR007C	HSH155	P49955	971 aa	Known RBP	2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms